Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1773 |
Symbol | |
ID | 4242238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 2702305 |
End bp | 2704974 |
Gene Length | 2670 bp |
Protein Length | 889 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638106898 |
Product | Na-Ca exchanger/integrin-beta4 |
Protein accession | YP_721506 |
Protein GI | 113475445 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.403539 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGAAT TTTCTCCAGA TGACCACTCT TTATTTCCCC AGGAACCAGA TGAGACATCC CTAAATGTCC ACTATCTCCC TGGGGCTGAC TCGAACCCTG AAGTTACAGA CCCGATGATA CAAGGTGCCT GGGGTGAGGT TCGTGACGAA TTGGCTGATT TTATCTTGGC TCCTGAGTTC GATGACTATA TTAAGACGGC TTTTGGTGAA ACTGTGGACC CGGAGCTGGC AAAAGAGCAA ATAAAGGATG TTTTGACTGG GGAAAATTTG CCGGAGGTTA TTATGTTGCC CGCGGCAGAT ATGGAGCCGG CGGTGGGTGC CTATGATCCT TTGACTGATT CAATTTATTT GGCTGATTCT TTATTGCCTG ATACTGATGG GGCAGAATAT GGGGTTTTGG TGGATGTGCT GTTGGAGGAG TTGGGGCATT TTTTGGACTC TCAGTTGTCT GACTCGGACT CCCCTGGAGA TGAGGGTGAG TTATTGGCTG GTTTGGTGAG GGGTGAGGAG TTGACTCAGT TTCAGGTGAT GATGCTTCGG GGTCAGGATG ATCGGGTAGA TATTTGGGTC GGGGGTGTTG AGGTTGAGGT TGAGGCTAGT GAAAAGGTTG ATTTTGAGAA GGTTGATGAT TTTTTGGTGG GAGATGAGCC TCGGTCATTA GTAGTAGGAG ACTTTAATAG AGATGGCATT CCTGATCTGG CTGTGGCGAA CAGGGCTGAT GACGACGTAT CAGTGTTATC AGGAAATGGT GACGGTAGTT TTGGTTCAGC TACTAATTTT TTTGTGGGAG ATAGACCAGA GTCACTAGCA GCAGGAGATT TTAATGGAGA TGGTATTCCT GATCTGGCTG TGGCAAATGC TGGTTCAGAC AACGTATCAG TTTTATCAGG AAAAGATGAC GGTAGTTTTG CTCGACGTAC TAATTTTCCG GTGGGAGACG AACCAAGATC AGTAGCAGTA GGAGATTTTG ATAGAAATGG CATTCCTGAT CTGGCTGTGG CGAACAGAGA CTCAAACAAT GTATCAGTGT TATTAGGAAA TGGTGAGGGT AGTTTTGGTT CAGCTACTAA TTTTCTGGTG GGAGACGAAC CAATATCAGT AGCAGTAGAA GATTTTAATG GAGATGGCAT TCCTGATCTG GCTGCGGCGA ACTTCTTTTC AGACAATGTA TCAGTGTTAT CAGGAAAAGG TGACGGTAGT TTTGGTCCAG CTATTAATTT TCCGGTGGGA GAGACACCTA CCTCAGTAGT AGCAAGAGAT TTTAATGCAG ATGGCATTCC TGATCTGGCT GTGGCGAACA GAGACTCAAA CAATGTATCA GTGTTATCGG GAAAAGGCGA CGGTAGTTTT GGTTCAGCTA CTAATTTTCC GTTGGGAGGC GGACCTTTTT CAGTAGCAGT AGAAGATTTT AATGGAGACG GCACTCCTGA TCTGGCTGTG ACGAACTTCT TTTCAGACAA GGTATCAGTG TCATTAGGAA AAGGTGACGG TAGTTTTGGT TCAGCTACTA ATTTTCCGGT GGGAGACAGA CCTTTCTCAT TAGCAACAGA AGATTTTAAT GGAGACGGCA TTCTTGATAT GGCTGTGGCG AACTGGTTGG ATGGCAACGT ATCCATCCTG ATCAACAAAA ACCCTATAAC CATCATTCCC AACATCACTA TCTCGGACAC CAAGATCACC GAAGGCAACA TAGATAAAAC CGCTAAATTC ACGGTCACTC TAGACAACCC CACAAACGCC ATAGTCAAAG TCAACTACAC CACAGCCAGC CAAACCGCAA AAGTCAACCA AGACTACAAA ATTACTACAG GCACTCTGAC CTTTCGACCA GGAGAAACGA ACAAAAACAT AACAGTTCCC ATCTTGGGAG ATAAGCGAGA CGAACCCAAG GAAAAATTCG GGCTAAAACT GAGGAGCCCC CAGAATGCGA ATATCAAAGA TGGGGAGGCT ACGGGCACTA TCGTTGATAA CGACCCACTT CCCCAAATAT CTATCGGCGA TGCCAAAGTT ACGGAAGGAA ACCGAGGTCA GAAAAACATG GAATTTGAAG TGAAATTAAA CAACCCCAGC GGGAAAACAG TGAGAGTAAA TTATGGAACC CAAGAGGGCA GCGCCAAGTC AGGAAAAGAT TTTCGAAATC AAAGGGGAGT CCTGACATTC AAGCCAGGGC AGACGGAAAA GATAGTGAAT ATTCCCATTT TGGGAGATAG GGTTGATGAA AATAACGAGG AGTTTCAAGT CAAACTCAGC CGTGCCAGAA ATGGAAAATT GTCAGATAAA ACAGCGGTCG GCAGAATTAT TGATAATGAC GACCCACTTC CCCAAATATC TATCAGGGAC GCTAAAGTGA CGGAAGGAAA CAGGGGTAAG AAACAGATGA AGTTTGAAGT TGAGCTCAAC AGCCTGAGCA CGAAAACAGT GAGGGTAAAT TACGCTACAG TAGATGGCAG CGCGAAGTCA GGAAAAGATT TTCAAAATAA AAGGGGAGTG GTGACATTCC AACCAGGGCA GAGGAAAAAG ATAGTGAATA TTCCTATTTT GGGAGATAGG GTTGATGAAA ATAATGAGCA GTTTCAAGTC AAACTCAGCC GTGCCAGAAA TGGTAGGTTG TCGGATAACA ACGCGATCGG CAGAATTATT GATAACGACG AAGGGGTTCC CAAAGATTAG
|
Protein sequence | MDEFSPDDHS LFPQEPDETS LNVHYLPGAD SNPEVTDPMI QGAWGEVRDE LADFILAPEF DDYIKTAFGE TVDPELAKEQ IKDVLTGENL PEVIMLPAAD MEPAVGAYDP LTDSIYLADS LLPDTDGAEY GVLVDVLLEE LGHFLDSQLS DSDSPGDEGE LLAGLVRGEE LTQFQVMMLR GQDDRVDIWV GGVEVEVEAS EKVDFEKVDD FLVGDEPRSL VVGDFNRDGI PDLAVANRAD DDVSVLSGNG DGSFGSATNF FVGDRPESLA AGDFNGDGIP DLAVANAGSD NVSVLSGKDD GSFARRTNFP VGDEPRSVAV GDFDRNGIPD LAVANRDSNN VSVLLGNGEG SFGSATNFLV GDEPISVAVE DFNGDGIPDL AAANFFSDNV SVLSGKGDGS FGPAINFPVG ETPTSVVARD FNADGIPDLA VANRDSNNVS VLSGKGDGSF GSATNFPLGG GPFSVAVEDF NGDGTPDLAV TNFFSDKVSV SLGKGDGSFG SATNFPVGDR PFSLATEDFN GDGILDMAVA NWLDGNVSIL INKNPITIIP NITISDTKIT EGNIDKTAKF TVTLDNPTNA IVKVNYTTAS QTAKVNQDYK ITTGTLTFRP GETNKNITVP ILGDKRDEPK EKFGLKLRSP QNANIKDGEA TGTIVDNDPL PQISIGDAKV TEGNRGQKNM EFEVKLNNPS GKTVRVNYGT QEGSAKSGKD FRNQRGVLTF KPGQTEKIVN IPILGDRVDE NNEEFQVKLS RARNGKLSDK TAVGRIIDND DPLPQISIRD AKVTEGNRGK KQMKFEVELN SLSTKTVRVN YATVDGSAKS GKDFQNKRGV VTFQPGQRKK IVNIPILGDR VDENNEQFQV KLSRARNGRL SDNNAIGRII DNDEGVPKD
|
| |