Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1731 |
Symbol | |
ID | 4245388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 2634407 |
End bp | 2637040 |
Gene Length | 2634 bp |
Protein Length | 877 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638106857 |
Product | hypothetical protein |
Protein accession | YP_721466 |
Protein GI | 113475405 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTAGTT CCAGTTTTGA GCACACCATT AAACTTTTGA TAGACCGACT CGCTCGAACC GGAATTTTAG AAGGTCTGGA ACTCAGCGAT GAAAATATTG CTGATAGTAT TTGGTTGGCT TTACAAATGG GTACGGTGAA GACTCCACAA AAGCCGAAGC CAAAATATGA ACAGCAACCG GAACAACTGC CGATAATTTT TGAAGACAGT GATCCTCAAC CTGTTACCGA GAGAGAACCT CAAGTATCAG TGATCACGGA GGAATCAATA GACCAAACCC CCGAAAAACC TCCAGTTAAA GGTTTGCCAT TCCAAACACC CGCGGCTCCA GCTCTCCAGA ATGTACTGGA GTTAGGTCGT GCTTTGCGTC CTCTGATGCG GAAAGTTCCC TCTCTCTCCA GAAAAACACT AGACGAAGAA GAAACTGTTA ATGTTATTGC CGAGCAGGAT ATCTGGTTGC CCGTTACTAA ACCAGAACCC GAACGCTGGC TTGACTTAGA ACTGGTGGTA GAAGAGTCGA GTTCCGCTTT TATTTGGAGA GAGACGGTGA ATGAAATGCA AGAAGTCTTG GAAACTCAGG GAGCATTTAA AAATGTCCGA GTCTGGAGTT TGCTCAGTTC AAATACTAAA AAATTAAAAT TAGTCCGGCG ACATAACAGC GGTAAACCAA AGCAACGTCA ACATAGTCAT CGAGAATTAA TTCATTCTAA CCAGCGGGGA GTAGTTATTT TTGTCAGTGA CTGTACTTCT AAAATTTGGC AAAATGGTAC TGTTCACCAC TGGTTAAAAG TTTGGTCAGA AAAAAACCCC ACAACAATAT TACAGTTATT CCCTGAATAT CTTTGGGATA GCACTCAACT GGGAGTGGGA AGTAAATTTT TTGGTACTGC TGTTGCACCA GGAGTTCCTA ACCCCCGGTT GGTTTTGGAA AATTTACCTC CCTGGATACC TATAAACTGG AAGAATGCTT TGGTTTTACC TGTCATTCTG CCTGAACCTG AACTTTTGAA AAGTTGGTGT CGGATAGTGT CCGGAGCTAG TAACTCACGA GTACCTATAT TTTTATTTGA TTTATCTTTT GTTGAAAAGC AATTTTGCCA AAAACAAGAA GACTCTCCAC CAGAGCTACC CACCCCTAAA AAAGAAATTT CACCTACAAC TAGGGTGAGA AAATTTCTGG CAACAACTTC TATTACTGCT CAACGACTCG CAGGGATGAT GGCGGCGGCT CCGGTGAATT TGTCTGTGGT TAACTTAATT CGCAAAACTC TCTTAAAGGA AGCTACCACC GTTCATGTGG CGGAAGTTTA TATGGGAGGT TTGCTTGCTC CAACTGACTC TAAGGATGAT CAACCAACTT ATGAATTTCT TCCTGGTGTC CGAAAAGAGT TGAACCAGGC AATGGGGCGC AACGAAACTA CGGCTGTTCT GGATGCTGTT TCTCGTTACA TCGCTGAAAA AATTGACCGA CCTATTCGTA GTTTTCGAGC TTTGTTGACC TTATTGCCTC AATATGAGGA GGAAGACCGG GAGCAAGTCT TACCTTTTGC TCAAGTTGCT GTTGATGTAT TGGAAAATTT AGGTGGAGAA TATGCTGAGT TTGCTGAGAA GGTTGCCCAG AAAATTCGAC CTGTTTCTGT TCCTCCCATT TTTGAAACTC CCGAGTCAGA AGTCAGATCA GAACCTCAAA TTCAAACTGA TACTTTTGAC GTTGCTTTCA TTGAAGTGCA GGAAACTGTA ACCTTTGAGT TTGATCTAGC AAGGTTGGAA AAAAGACGTT CAGAATTATT GAGATTATTT GGATATCGAT GGGCTATCAA AAAACAACGC CGACAAGTTA CAGGTATTGT GGAAGACTTG GGGAATGGAA TTAAACTTGA AATGGTGGAA ATTCCCCCAG GAAAGTTTCT TATGGGCTCC CCAGAAGATG AATTGGAACG AGAAAGTCGT GAAGGTCCTC AACATCAGGT GAATATTTCA GCTTTTCTCA TGGGTCGCTA CCCTGTTACT CAAGGTCAGT GGAAAGCCAT TGTTGATAAT GTGCCAAAAA TTGAACGTGA CCTTAAGTCT AACCCTTCAT ATTTTAAAGG AAATGATCGA CCTGTAGAAA GAGTGTCTTG GTATGATGCA GTAGAGTTTT GTGCCAGACT ATCCAAATAT ACAGGCAGAA ACTATGGGCT TCCCAGTGAA GCTCAATGGG AATATGCTTG TCGTGCAGGA ACAACTACAC CCTTTCATTT TGGGGAAACT ATTACTACAG ACCTGGCCAA TTATGATGGC AATTATACTT ATGGCCAAGG GACAAAAGGC AAGTATAGAG AAGAAACAAC TCCTGTTGGT AGTTTTGAAG TGGCCAATCC TTTTGGCTTA TACGATATGC ACGGGAATGT TTACGAATGG TGCGAAGATG ATATGCATGA TAATTATGAG GGTGCACCCA ATGATGGTAG TCCATGGCTA TCAGGTAATC AAAATACTAC AAAATATTCT ACAAAAGTAT TACGGGGCGG CTCCTGGCTC AACTATCCTT GGTGGTGTCG CTCTGCGTAC CGCTACGACT TTAGCTCGGA CGGGGCGGTC ATCATCAATT TTGGTTTTCG TCTTGTGAGT TTCCCCCCCA GGACTCTTGA ATAG
|
Protein sequence | MSSSSFEHTI KLLIDRLART GILEGLELSD ENIADSIWLA LQMGTVKTPQ KPKPKYEQQP EQLPIIFEDS DPQPVTEREP QVSVITEESI DQTPEKPPVK GLPFQTPAAP ALQNVLELGR ALRPLMRKVP SLSRKTLDEE ETVNVIAEQD IWLPVTKPEP ERWLDLELVV EESSSAFIWR ETVNEMQEVL ETQGAFKNVR VWSLLSSNTK KLKLVRRHNS GKPKQRQHSH RELIHSNQRG VVIFVSDCTS KIWQNGTVHH WLKVWSEKNP TTILQLFPEY LWDSTQLGVG SKFFGTAVAP GVPNPRLVLE NLPPWIPINW KNALVLPVIL PEPELLKSWC RIVSGASNSR VPIFLFDLSF VEKQFCQKQE DSPPELPTPK KEISPTTRVR KFLATTSITA QRLAGMMAAA PVNLSVVNLI RKTLLKEATT VHVAEVYMGG LLAPTDSKDD QPTYEFLPGV RKELNQAMGR NETTAVLDAV SRYIAEKIDR PIRSFRALLT LLPQYEEEDR EQVLPFAQVA VDVLENLGGE YAEFAEKVAQ KIRPVSVPPI FETPESEVRS EPQIQTDTFD VAFIEVQETV TFEFDLARLE KRRSELLRLF GYRWAIKKQR RQVTGIVEDL GNGIKLEMVE IPPGKFLMGS PEDELERESR EGPQHQVNIS AFLMGRYPVT QGQWKAIVDN VPKIERDLKS NPSYFKGNDR PVERVSWYDA VEFCARLSKY TGRNYGLPSE AQWEYACRAG TTTPFHFGET ITTDLANYDG NYTYGQGTKG KYREETTPVG SFEVANPFGL YDMHGNVYEW CEDDMHDNYE GAPNDGSPWL SGNQNTTKYS TKVLRGGSWL NYPWWCRSAY RYDFSSDGAV IINFGFRLVS FPPRTLE
|
| |