| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1714 |
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| Symbol | hemE |
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| ID | 4243313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 2607210 |
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| End bp | 2608274 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638106842 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_721451 |
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| Protein GI | 113475390 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.451104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAAT TAAGCCAAGT ACCCTATTTA TTACGAGCAA CTCGGGGTGA ATTATTAGAT
CGTCCACCTG TATGGATGAT GAGACAGGCA GGTCGCTACA TGAAAGCTTA TCGAGACTTA
CGAGAGAAAT ATCCCTCATT TCGCGAGCGT TCTGAAAACA CAGATATTGC TGTGGAAATA
TCCCTGCAAC CTTTCCACGC TTTTAAGCCA GATGGAGTAA TTTTATTCTC AGACATCCTG
ACTCCACTCC CAGCAATAGG CATTGATTTT GATATCATCG AAAGCAAAGG ACCAATTATT
GACCCCCCTA TTCGCACTGA AGCTCAAATT GACAAGCTTC ATCCCATCGA ACCAGAAGAG
TCTCTACCTT TTATTAGGGA AATTTTACAA ACTCTCAGAA GAGAAGTTAA GAACGAGGCA
GCAGTTTTAG GTTTTATTGG GGCTCCTTGG ACTTTAGCTG CTTACGCCAT AGAAGGTAAG
AGTTGTAAAG ATTATACCAA TATCAAAAAA ATGGCTTTTT GTCAACCAGA AATGTTACAT
AAATTTCTAG GAAAGCTGGC AGAAGCGATC GCCGTTTATG CTCGTTATCA GATAAACAGT
GGAGCACAAG TCATCCAAAT GTTTGATTCT TGGGCAGGTC AACTTAGTCC TCAAGACTAT
GAAACTTTCG CTTTGCCCTA TCAAAAATTA GTGGTGCAGG AAGTTAAAAA GACCCATCCT
AATACACCTT TTATTCTATA TATAAATGGT AGTGCCGGAT TATTAGAGAG AATGCCCCAG
ACTGGTGTTG ATATAGTGAG TGTGGACTGG AGTGTAGACA TAGCCGAAGC TAGACAACGC
CTTGGTAATA ATATTTGTGT ACAAGGAAAT ATAGACCCCG GTGTACTGTT TGGTTCTCAA
GAATTTATCA AATCTCGCAT ACTAGAAACT ATTCGCAAAG CTGGCAACCG AGGTCATATA
TTAAATTTAG GACATGGTGT TTTGAAAGAA ACTCCTGAAG AGAATGTAGA GTTCTTCTTT
AAAACAGCAA AAGAAATAAG TAGTTTACTA GCATTAACCG CTTAA
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| Protein sequence | MAQLSQVPYL LRATRGELLD RPPVWMMRQA GRYMKAYRDL REKYPSFRER SENTDIAVEI
SLQPFHAFKP DGVILFSDIL TPLPAIGIDF DIIESKGPII DPPIRTEAQI DKLHPIEPEE
SLPFIREILQ TLRREVKNEA AVLGFIGAPW TLAAYAIEGK SCKDYTNIKK MAFCQPEMLH
KFLGKLAEAI AVYARYQINS GAQVIQMFDS WAGQLSPQDY ETFALPYQKL VVQEVKKTHP
NTPFILYING SAGLLERMPQ TGVDIVSVDW SVDIAEARQR LGNNICVQGN IDPGVLFGSQ
EFIKSRILET IRKAGNRGHI LNLGHGVLKE TPEENVEFFF KTAKEISSLL ALTA
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