| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1710 |
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| Symbol | |
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| ID | 4243309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 2601980 |
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| End bp | 2603347 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638106838 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_721447 |
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| Protein GI | 113475386 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.841637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATCTA TAATTAAAAA TAGCTTTATT CGATTAACTT TAGTCAACAT TTTATCTAAT
TTAATGGTAC CTTTAGCAAG TCTAATAGAC TTAGCTTTTT TAGGTTATTT AGATGAAATT
CGTCATTTAG CAGGAGTTTC CATTGCCACA GTTTTATTTA ACTATATTTA CTGGACTTTT
GGATTTTTAC GCATGAGTAC AACTGGTACA ACTGCTCAAG CTAATGGCAG TAGAAATTAC
CACGAAGTAA AACAAATTTG TCTACGTAAT TGCTTAATTG CTTTAACCAT TGCCACAATA
ATTATAATTT TCCAATATCC TTTACGAGAA ATTGGCTTTA ATTTACTTAG TGCAACTCCA
GAAGTAAAAG CTAGTGGTAT TAACTACTAT AAAAGTTTAA TTTGGGGTGC CCCTGCTACC
TTATTAAACT TCGTATTAAT AGGTTGGTTT TTAGGACTCG AACAAGGAGG AAAAGTTTTA
CTATTATCAA TAGTTAATAA AGGAACAAAT ATTATCCTAG ACTATATTTT TATTGTTCGT
TGGGGATGGG AAAGTAGCGG AGCTGGTAGT GCTACAGCAA TAAGTCAATA TATAACTTTA
GTTATCGGTA TGATTTGTGT TTTTAAATTC ATATATTTAG CAGAAATTCC TCAGTTAATC
AAAAATATTT GGCAACCTCA AGTAATTAAA AAAACTTTTA TTCTCAATCG AGATATTCTG
ATTCGTACTT TTGCTATAAT TTCTACTTTT GCTGTATTTA CTAATTTAAG CTCATACATA
AATACTCTAG TTTTAGTAAC TAATACTCTG TTATTACAGG TAGTTACATT AGCCGCTTAT
TTTATTGACG GTCTAGCTTT TGCCACAGAA AGCTTAGCAG GAAAAAGTTA TGGTAAAAGA
AATCAAAAAG AATTAAAAGC ATTGGTAAAA TTATCAGGGA TAATTGGTAT AAGTATCGGA
TTAATTTTTG CCTTTATTTT CTGTTTATTC CCGACTACTT TATTTAGTTT GTTGACTAAT
CATACTCAGG TTATTAACAA TATTAGTAGT TATGTTTTAT GGTTAATACC TATCTTGGGT
TTTGGAGGCA TAGCTTATAT TTTAGATGGT TATTTTCTAG GTTTAACTCA AGGAAATTTG
TTGCGCAATT CTACTTTAGT TGCTAGTTTA ATAGGATTTT TACCCTTTGC TATAGTCGGT
TTATTGTTAA AAAATAATCA TATATTATGG TTATCTTTGG CAATGTTTAT GGCAACTAGA
GCTATTACTC TAGGTAAGGC TATTCCTAAT ATAATTGTTG AAAAATTTTC GGCTTCAATA
GAACTCATCA AAGACAAGAA TAATAAAAAA CATATTACTC CTAAATAA
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| Protein sequence | MKSIIKNSFI RLTLVNILSN LMVPLASLID LAFLGYLDEI RHLAGVSIAT VLFNYIYWTF
GFLRMSTTGT TAQANGSRNY HEVKQICLRN CLIALTIATI IIIFQYPLRE IGFNLLSATP
EVKASGINYY KSLIWGAPAT LLNFVLIGWF LGLEQGGKVL LLSIVNKGTN IILDYIFIVR
WGWESSGAGS ATAISQYITL VIGMICVFKF IYLAEIPQLI KNIWQPQVIK KTFILNRDIL
IRTFAIISTF AVFTNLSSYI NTLVLVTNTL LLQVVTLAAY FIDGLAFATE SLAGKSYGKR
NQKELKALVK LSGIIGISIG LIFAFIFCLF PTTLFSLLTN HTQVINNISS YVLWLIPILG
FGGIAYILDG YFLGLTQGNL LRNSTLVASL IGFLPFAIVG LLLKNNHILW LSLAMFMATR
AITLGKAIPN IIVEKFSASI ELIKDKNNKK HITPK
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