Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1703 |
Symbol | |
ID | 4244088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 2587137 |
End bp | 2589089 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638106832 |
Product | carbamoyltransferase |
Protein accession | YP_721441 |
Protein GI | 113475380 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2192] Predicted carbamoyl transferase, NodU family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACATCC TAGGAATTTC AGCTTATTAC CACGATAGTG CAGCAGCTCT CGTATGTGAC GGAAAAATTA TCGCCGCCGC CCAAGAAGAA AGATTTTCTC GTAAAAAACA TGATCCCAGA TTTCCCCAAA ATGCTATTTC CTATTGTCTG AAAGAAGCCA ACATAGAATT ACTGGACTTA GACCAAATAG TTTTTTACGA CAAACCTTTA GTTAAATTCG AGCGACTTCT GGAAACTTAC CTCAGCTATG CTCCTAAAGG CTTTCGGTCT TTTCTCATGG CAATGCCGAT CTGGTTAAAA GAAAAATTAT ATTTAAAAAC CCTTTTAAAA AAAGAATTAG CTACATTGGG TCAGTGTAAA GCATCCCATA TCCCCAAACT GATGTTTACC GAACATCATC AAGCTCATGC AGCTTCAGCT TTTTTCCCCA GTCCCTTTGA CCGTGCTGCG GTAATGTGTC TGGATGGAGT GGGTGAGTGG GCGACTACTT CAGTTTGGTT GGGAGAAGGA AATAAACTTA CTCCCCAGTG GGAAATTGAT TTTCCTCACT CTTTAGGTTT ACTCTACTCA GCTTTTACTT ATTACACAGG CTTCAAAGTC AATTCTGGGG AATACAAACT TATGGGTTTA GCTCCTTATG GAGAACCTAA TTATGTAGAC TTAATTTTAA ATAACCTTAT AGATTTAAAA GCTGATGGTA CTTTCCGGTT GAATATGGAA TATTTCAATT ACACAACCGG GTTGACTATG ACTAATGAGA AGTTTGATAA ATTGTTTGGC GGGTCTCCTC GAAAAGCTGA AACTAAAATT AGTCAACGAG AAATGGATAT TGCTGCTTCT ATTCAGAGAG TAACTGAGGA GGTGGTATTA CGTCTGAGTC GAACGGTGCA AAAAGAACTT GATACTGACT ATCTTTGTTT GGCAGGGGGA GTTGCTCTTA ATTGTGTAGC GAATGGTAAA GTTCTACGGG AAGGTATTTT TAAGGATATT TGGATTCAAC CTGCAGCGGG AGATGCTGGT GGTGCCTTAG GTGCTGCTTT GGCTGTTTGG TACGAATACC ATGACCAACC GCGGGTAATA GAAAAGCTTG ATAGTAGGAA GGTTCCTAGG AATATTTCTA AGGAATACAA TGTTTCTGCT TCTGTGGAGT CTAGAAATTC TGCTGTTTCT GTGGCAAAAC GTCTTGTTTG TAGTGCTCCT AATGACATGA TGCAGGGTGC TTATCTCGGA CCTAAGTTTG AAGATGAGGA GATTCGGGAA TATCTTGATG CTATTCAGGC AAAATATGAA TATTTGCCAG ATACAGAGTT AATGCCTCGG TTGGCAAAAA TTTTGGATAA TGGCAATGTG GTGGGATGGT TTCAAGGTCG GATGGAGTTC GGACCTCGCG CTTTGGGTGG GCGGTCTATT ATTGGAGACC CTCGAAATAC TAAGATGCAG TCGGTGATGA ATTTGAAGAT TAAGTATCGG GAGTCTTTTC GACCTTTTGC TCCTTCGGTT TTGGCGGAAC GAGTTTCGGA TTATTTTGAT ATTGAACATT CTAGTCCTTA TATGTTGTTG GTAGCTCCGG TGCAGGAGGG TTTGTTAATT CCTATGACTG AGGACCAAAG GCAGTTGTTT GGTATTGAGA AGTTGAATGT GCCACGCTCG GAAATTCCGG CTATTACTCA TGTTGATTAT TCGGCGAGAA TTCAAACTAT TCATCAGGAA ACTAATCCTC GTTATCATGA TTTGATTAGT CATTTTGAAA AGCTCACGGG ATGTGGGGTA ATTGTGAATA CTTCTTTTAA TGTGCGGGGT GAACCAATTG TTTGTACTCC GGAGGATGCT TATCGGTGTT TTATGCGGAC TGAGATGGAT TATTTGGTGG TGGAGAATTT TTTGATGGCT AAAACGGATC AAATTCCTTG GGAAAAGGAT GAGTCTTGGA AGGAGGAGTT TGAGTTGGAT TAG
|
Protein sequence | MNILGISAYY HDSAAALVCD GKIIAAAQEE RFSRKKHDPR FPQNAISYCL KEANIELLDL DQIVFYDKPL VKFERLLETY LSYAPKGFRS FLMAMPIWLK EKLYLKTLLK KELATLGQCK ASHIPKLMFT EHHQAHAASA FFPSPFDRAA VMCLDGVGEW ATTSVWLGEG NKLTPQWEID FPHSLGLLYS AFTYYTGFKV NSGEYKLMGL APYGEPNYVD LILNNLIDLK ADGTFRLNME YFNYTTGLTM TNEKFDKLFG GSPRKAETKI SQREMDIAAS IQRVTEEVVL RLSRTVQKEL DTDYLCLAGG VALNCVANGK VLREGIFKDI WIQPAAGDAG GALGAALAVW YEYHDQPRVI EKLDSRKVPR NISKEYNVSA SVESRNSAVS VAKRLVCSAP NDMMQGAYLG PKFEDEEIRE YLDAIQAKYE YLPDTELMPR LAKILDNGNV VGWFQGRMEF GPRALGGRSI IGDPRNTKMQ SVMNLKIKYR ESFRPFAPSV LAERVSDYFD IEHSSPYMLL VAPVQEGLLI PMTEDQRQLF GIEKLNVPRS EIPAITHVDY SARIQTIHQE TNPRYHDLIS HFEKLTGCGV IVNTSFNVRG EPIVCTPEDA YRCFMRTEMD YLVVENFLMA KTDQIPWEKD ESWKEEFELD
|
| |