Gene Tery_1627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1627 
Symbol 
ID4242411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2486145 
End bp2488037 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content39% 
IMG OID638106767 
ProductWD-40 repeat-containing serine/threonin protein kinase 
Protein accessionYP_721377 
Protein GI113475316 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase
[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.59765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0942713 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCATT GCCTCAACCC CAACTGTCAA ATTCCCCAAA ACCCAGACTG GAATAAATAT 
TGCCAAAATT GTGGCTCAAA ACTACTACTC AAAGACCGCT ATCGACCTTT AAACCTAATT
GGTCAAGGAG GTTTCGGTAG AACATTCCTC GCTACCGACG AAGATAAACC CTCCAAACCC
TACTGTGTCA TTAAACAATT TTTTCCCGCA TCACAAGGAA CAAACAATAT TAACAAAGCT
GCCCAACTCT TTGAAAAAGA AGCCACAAGA TTAGACCAGT TGGGCAAACA TTCTCAAATT
CCCGAACTTA TGGCCCACTT CACCCAAGAT GGCCGACAAT ATTTAGTACA AGAATTCATT
GCTGGACAAA ACTTGGCCGA GGCTTTAAAA ATTGAGAACT CCTACAATGA AGACCAAATT
AGGGGTTTAC TAAAAAATTT ACTCCCAGTA CTACAGTTTA TTCATTCTCA TAACGTTATT
CACAGGGATA TCAAACCAGA AAATATTATT CGTCGTCAAA ATAGCGATCG CGAGTTAGTA
TTAGTAGACT TTGGTGCAGC TAAATACGCC CTAGGTACGG CCCTCCTGAA AACAGGTACA
ACTATCGGTA CCCCTGAATA CACCGCTCCC GAACAAAACC GAGGCAAAGC AGTATTTGCT
AGTGACTTAT ACAGTCTAGG AGTAACTTGC TTGCATCTAT TAACCAAAAT TTCCCCATTT
GAATTATTTG ATGTAGGTGA AGGAACATGG GTGTGGCGTC GCTACTTACA GAATAATTCT
ATTAGTGAAA AATTAGGTGA TATTCTAGAT AAACTGGTGG AAAATGCAGT CAACCGTCGT
TATCAGTCTG CTGATGAAGT TATGGAAAAC TTAAATGCAG ACGACTTGAC TTTTATTCAA
GATAAAACTG TTATCCAAAA ACCAGAAATT ACACCTGAAC CTTTACCAAG TAAAACTTGG
AAATGCATAG ATACTCTCAC TGGTCATCGA AAATGGGTTT GCTCCGTTGC TTTGAGAAAT
GATCAAAAAA TTTTGGCGAG TGGGAGCGAA GATGAAACCA TTAAATTGTG GGAAGTAGAT
AGTGGTAGAG AAATATTGAC TATCCGCGGA CATTCTGGTT ATGTAAACTC TGTTGCTTTT
AGTCCTGATG GCAAAATATT AGCGAGTGGG AGTGATGACA AAACTATCAG ACTTTGGGAA
GTTCAGACGG GAAAACTACT TTGCATTCTC GGTGACTGGG GTCGGGGAGA ATATTTTGGT
CATTCTGGAG GAGTTACGGC GATCGCTTTT CACCCAGATG GCAAAAGTTT AGCTAGTGCT
AGTAAAGATA AAAATGTGAA AGTTTGGCGA CTGGGGGATG ATATTTATGA CCCTAACTAT
GGGAGAGTGA TCATGACTTT GACTGGACAT TTACAACAAG TACGGGCGAT CGCCTTCAGT
CCAGATGGCA AAACTTTGGC AAGTGGTAGT CAAGATAATA TGATTAAAAT ATGGGATTTA
AGTTTAGGCA ATACTGTTAA AAATCTATGT CATTATTATC AGGGAACACA TTATATTTAT
ACGGTTGCTT TTAGTACTGA TGGTAAAGTT TTAGCTAGTG GCGGTCGCGA TAGAAATATT
AAAATTTGGG AAATAGAAAG CGGTGAAATA TTAAAAATTT TGGAGGGACA TTCTAGTGAT
ATTCGTCAAG TAGTTTTTAG TCCTCAAGGA GATATTATTG CCAGTGGTAG TGAGGATGGA
ACTATTAAAA TTTGGGATGG GAAAACAGGT CAGGAAATTG GAAATTTAGT AGGTCATTCA
AAATATATTA ATTCTGTTAC TTTTTCTAGG GACGGAAAGA GTTTAGCTAG TGGTAGTAGT
GATAATACTA TTAGAATTTG GCGACAGGAG TAA
 
Protein sequence
MTHCLNPNCQ IPQNPDWNKY CQNCGSKLLL KDRYRPLNLI GQGGFGRTFL ATDEDKPSKP 
YCVIKQFFPA SQGTNNINKA AQLFEKEATR LDQLGKHSQI PELMAHFTQD GRQYLVQEFI
AGQNLAEALK IENSYNEDQI RGLLKNLLPV LQFIHSHNVI HRDIKPENII RRQNSDRELV
LVDFGAAKYA LGTALLKTGT TIGTPEYTAP EQNRGKAVFA SDLYSLGVTC LHLLTKISPF
ELFDVGEGTW VWRRYLQNNS ISEKLGDILD KLVENAVNRR YQSADEVMEN LNADDLTFIQ
DKTVIQKPEI TPEPLPSKTW KCIDTLTGHR KWVCSVALRN DQKILASGSE DETIKLWEVD
SGREILTIRG HSGYVNSVAF SPDGKILASG SDDKTIRLWE VQTGKLLCIL GDWGRGEYFG
HSGGVTAIAF HPDGKSLASA SKDKNVKVWR LGDDIYDPNY GRVIMTLTGH LQQVRAIAFS
PDGKTLASGS QDNMIKIWDL SLGNTVKNLC HYYQGTHYIY TVAFSTDGKV LASGGRDRNI
KIWEIESGEI LKILEGHSSD IRQVVFSPQG DIIASGSEDG TIKIWDGKTG QEIGNLVGHS
KYINSVTFSR DGKSLASGSS DNTIRIWRQE