Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1623 |
Symbol | |
ID | 4242407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 2478251 |
End bp | 2480092 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638106764 |
Product | hypothetical protein |
Protein accession | YP_721374 |
Protein GI | 113475313 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.54291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAAGCA TTACAACCAT CTCCCAGTTA GAATTAACAT TCACAGAAAT AGCAGGAACA ATATTTTCTA TTACTGGTAA CGATACTTTT ATTCTGAGGG CAGATAATGG TCAAAACTTC TTTGTTGACC TTATAGATGA ACTAAATACT TCGATCTTGG GTTTACAGGT TGGTAAGTCA GTTAGAGTTA CAGGTTTTCT CAATATAGAA AATAACCGAT TTAACCTAAT TAATACAATT CTAATTAATC AGGATGGTAC AAGACCACCA CTACCAATTT TTGGTATACA AACTATTTCT GGAACTGTTG GTTTTGTGGT TAATGATAGT CAATTTATTC TCAACTCAAA TGGTCAAATA TACTTTGTTA ATTTATTAGA TGAATTTAAT GCTATAGGAT TAGGTTTACA ACCAAATCAA ATTATTGCAA TTTCTGGTTC TGTTACCTTA GAAAATGGTA GAATTGATGT TAATAGTTCT AGGATTATAG ATGGTGTAAA TATTCCGACT CAACCTCCTT TTCTCCCTGA TGGTGAATTT CCACCCGGTT CAATTATTGG TAATAATAGT ACTCAATTTA TTCAAGGTAC TTTTAACAGT GATACTGTTT TTGGCTTTGG TGGCAATGAT ACTATTGATG GTCAAGATGG TAATGATAGT CTGTTTGGCA ATTCGGGGAG TGATAGTATT GTTGGGGGTA TAGATGATGA TATTATTTTT GGCAATGTCG GAATAGATAC TATTGATGGC CAAGATGGTA ATGATAGTAT TTTGGGGAAT GAGGATGATG ATATTCTCGG TGGTGGTGAA GACAATGATA CTATCCGGGG TAATACAGGT AGTGATGAAA TAGATGGGGG GAGCGGTGAT GATGGTCTCT ACGGTAATGT GGGCAGTGAT AGTATTTTTG GCAATGTTGG TAATGACAGT ATTTGGGGCA ATGAAGATAG CGATCGCTTA GAAGGTGGGC CCGGAAATGA CAGTATTTGG GGCAATGAAG ATAGCGATCG CATAAAAGGC GGGTTCGGAG ATGACAATAT TTGGGGCAAT GAAAATAGCG ATCGCCTAGA AGGTGGGTTC GGGAATGATA GTGTTGTTGG CAATGAAGGG AATGATAGTA TTTTTGGTAA TGAAGGGAAT GATAGTATTT TTGGCAATGA AGAGAATGAT AGTATTTTTG GCAATGAAGG GAATGATAGT ATTTTTGGCA ATGAAGGGAA TGATAGTATT TTTGGTAATG AAGGGAATGA TAGTATTTTC GGTAATCAAG GAAATGACTG TCTGGAGAGT AACTCAGGTG ATGATACTAT TCGTGGAGGA AAAGGTGATG ATATAGTTGA TGGTGGTTTT GATTTAGATT TTCTCTTAGG AGAATTGGGT AATGATCAGT TGAGTGGAGG AGACGGTGAT GATTTAATAT TTGGTGGTAA GGATGATGAT TTAATATTTG GTGGTGGGGG GAATGATACT CTCAATGGAG ATATGAACAA TGATACTATT ATTGGGCAGT TGGGTAATGA TTTTATTATT GGTACAAGTC TTAAGTCTGG AGAAAATGAG ATTGATTTTT TGATTGGTAG CGAGGGAACT GATACCTTTG TTTTGGGTAA TAGCAATGTT GCTTTTTACA GTTTTGCTGG TAGTAGTGAT TATGCAGTAG TTACTGATTT GAATAATTTG GAAAGTGATA AGATGATTGT ATTTGGTGGT GATGGAATTG TTTTAGGACC TGCTTCTGTA GGTACGGATC AAGGTACAGG AATTTTTGTG GATGAAGATT TAATAGCTAT TGTTGTTGGA GTCACGGTGT TGGATCTTCA AAGTGGGTTG ATTTTCATTT AG
|
Protein sequence | MTSITTISQL ELTFTEIAGT IFSITGNDTF ILRADNGQNF FVDLIDELNT SILGLQVGKS VRVTGFLNIE NNRFNLINTI LINQDGTRPP LPIFGIQTIS GTVGFVVNDS QFILNSNGQI YFVNLLDEFN AIGLGLQPNQ IIAISGSVTL ENGRIDVNSS RIIDGVNIPT QPPFLPDGEF PPGSIIGNNS TQFIQGTFNS DTVFGFGGND TIDGQDGNDS LFGNSGSDSI VGGIDDDIIF GNVGIDTIDG QDGNDSILGN EDDDILGGGE DNDTIRGNTG SDEIDGGSGD DGLYGNVGSD SIFGNVGNDS IWGNEDSDRL EGGPGNDSIW GNEDSDRIKG GFGDDNIWGN ENSDRLEGGF GNDSVVGNEG NDSIFGNEGN DSIFGNEEND SIFGNEGNDS IFGNEGNDSI FGNEGNDSIF GNQGNDCLES NSGDDTIRGG KGDDIVDGGF DLDFLLGELG NDQLSGGDGD DLIFGGKDDD LIFGGGGNDT LNGDMNNDTI IGQLGNDFII GTSLKSGENE IDFLIGSEGT DTFVLGNSNV AFYSFAGSSD YAVVTDLNNL ESDKMIVFGG DGIVLGPASV GTDQGTGIFV DEDLIAIVVG VTVLDLQSGL IFI
|
| |