Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1605 |
Symbol | |
ID | 4242988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 2452863 |
End bp | 2453960 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638106747 |
Product | type IV pilus assembly protein PilM |
Protein accession | YP_721357 |
Protein GI | 113475296 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAATT ACTTAAAAAA CTTATTTCAA ACAAAGCAGC CAGGAATAGG AATAGAAGTT AGTCCGGAAA AAATTAATCT TGCTAAGATC CAGCAACAAG GAGATCAACT AAAATTAGTA AATTTTGCTA CAGCACAAGT CCCAGAAAAT GTATTTTCTG AGGGTCAAAT AATTGATATC CCCACAATAT CAGAATTAAT AGAATCAATT ATTGCAGACA ATAACATAAA AACTCGCAGA GTAGCAACAG CAATTTCAGC CAGAGAAGCA GTTACCCGTG TAATTCCCGT ACCAGCAGAA TTAAATGACC AAGAATTACA GGATTATATG AATCAAGAAG CAGGTTTATA CTTACCATTC CCGAGAGAAC AAGCAGATGT GGACTATCAA AAATTGGGAA ATATAGTAGA CTCAGATGAT GACATAGAAA AAGTACAAGT AGCTTTAGTT GCAACGAGAA AAGAAATAAC AGATGCCTAT ATAGAAGCCT TTTCAGAAGC AGGATTAGTA ATAGATATTT TAGAGGTAAG TAACTTTGCC CTCATCCGCA CAGTTAAAGA TATACTCCAA CAATATGGGC CTCAAGAAGC GACAGTAATT GCAGATTTAG AATTTGACAG TACCGAACTT GCTATCGTAG TAGATGGAAT ACCCCAGTTT AACCGAACAA TTCCTATTGG TACTTATCAA ATGCAATCTT CCTTAAATGA AGCGATGAAC TTACCTCCAA CCAGAGATAC TACCCAGTTA CTAAAGATGA CTATTCCAGT GTTAGATACA ATGGGAATTT CATTCGATAA AGCTGATTCT GGAACGAATG CCTTGTTAAA AGTATTAGCA GAATTAGGAG ATGAGCTGCG ACGTTCAATA GATTTCTATC TCAATCAATT TGAAGATTTG GAGGTGGCAC AATTATTATT AACAGGGCCA GGAGCAGCAA TAGGACAACT AGATGACTTT TTCATGCAAC GTTTAAGTTT GCCAGCGTCT AAAGTGGATC CAATTGAAGT TTTAGGCTTA GAAACAGAGG TAGAAATTCC CCCAGAACAA CGTTATGGTC TAGGAATTGT ATTAGGTTTA GGACTAAGAG AGGTGTAA
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Protein sequence | MLNYLKNLFQ TKQPGIGIEV SPEKINLAKI QQQGDQLKLV NFATAQVPEN VFSEGQIIDI PTISELIESI IADNNIKTRR VATAISAREA VTRVIPVPAE LNDQELQDYM NQEAGLYLPF PREQADVDYQ KLGNIVDSDD DIEKVQVALV ATRKEITDAY IEAFSEAGLV IDILEVSNFA LIRTVKDILQ QYGPQEATVI ADLEFDSTEL AIVVDGIPQF NRTIPIGTYQ MQSSLNEAMN LPPTRDTTQL LKMTIPVLDT MGISFDKADS GTNALLKVLA ELGDELRRSI DFYLNQFEDL EVAQLLLTGP GAAIGQLDDF FMQRLSLPAS KVDPIEVLGL ETEVEIPPEQ RYGLGIVLGL GLREV
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