Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1604 |
Symbol | |
ID | 4242987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 2451467 |
End bp | 2452744 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638106746 |
Product | extracellular solute-binding protein |
Protein accession | YP_721356 |
Protein GI | 113475295 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTCTCA TAGTTAAATG GAAAAGGTTT AAAATATTTA CTATTCTGGG GCTAATTATA ACAATTTTTA TTGGTTGCAC TTCTCCCTAT CCTATTTTAA AGACTAAAGA AATTGAATTT TGGACAATAC AGCTTCAACC TCAGTTTACT AATTATTTTA ATCAGTTAAT TGCTGATTTT GAAGCAGATA ATCCAGATTT ATCAGTGCGA TGGGTTGATT TACCTTGGTC GGAGATAGAA AGCAAAATTG AGAGTGCTAT TGTCACAGAA ACTCTTCCAG ACATTGTGAA TCTTAACTCA AGTTTCACAC ATTTATTAAC TCGACCTAAT GCCTGGCTAA ATTTAGATAC TATTTTATCA GATTCGGTGA GGAATGAATA TTTACCTAAT CTTTGGCAAT GTAGTCAGAT TAATGGTAAA AGTCTTGGTA TCCCATGGTA TGGTACGATG AATATAACAA TTTATAATTC AGAGCTATTT AAAGAGGCAG AACTCGAAGA ACCTCCAACA AATTATACTG AATTAGCTAA GGTCGCTAGA CAAATTAAAG AAAAAACTGA TAAATATGCA TTCTTTGTTT CTTTTTCGCC ACAAGGAGGA AATGAGGTAT TAGAGTCTTT TGGCAAGATG GGAGTTGAGT TAATAAATGT TGATGGAAAA GCTGCTTTTA ATACTCCACT CGGTGAGGCA GTATTTAAGT ATTGGGTTGA TCTATATAGA GAAGATTTAT TACCAGAGGA AGTATTGACC GAAGGAATTC AAGCAGGTGA AGATTTGTAT CAAGCTGGAG AAACTGCTAT GGTATTTTCT GGACCAGAGT TTATTACAGC CATATCTGAA AATATACCTG AAATTGGAAA GGTATCATTC CCAACATCTC AAGTTACAGG TAAGACTGAT AAGAAGGGTA TAGTTTTGAT GAATTTTGCT ATTTCTAGCA AAACTAAATT ACCAGATGGA GCCCTGAAGT TTGTTTTGTT TATTACTAAT TATCAAAATC AAATGGCTTT TGCTCAGGAG ACTAATGTTT TACCCTCTAC AACTAAGACC TTAAAAAATA GTTATTTTCA AAATATTTCT TCTGATGCTT CTACTCAAGA TCGGGGTCGA GTTATTAGTG CTAATCAAAT TTTGGCAGCA GAAGTTTTAC TGCCACCTAT TAAAAATTTG GATAAGTTGA AACAAATTAT TTATCAAAGT TTACAGGAGG CTATGTTGGC AGAAAAAACT ATTGAGCAAG CGATCGCTGA TGCCGCATCT GAATGGGATA AGCTTTGA
|
Protein sequence | MFLIVKWKRF KIFTILGLII TIFIGCTSPY PILKTKEIEF WTIQLQPQFT NYFNQLIADF EADNPDLSVR WVDLPWSEIE SKIESAIVTE TLPDIVNLNS SFTHLLTRPN AWLNLDTILS DSVRNEYLPN LWQCSQINGK SLGIPWYGTM NITIYNSELF KEAELEEPPT NYTELAKVAR QIKEKTDKYA FFVSFSPQGG NEVLESFGKM GVELINVDGK AAFNTPLGEA VFKYWVDLYR EDLLPEEVLT EGIQAGEDLY QAGETAMVFS GPEFITAISE NIPEIGKVSF PTSQVTGKTD KKGIVLMNFA ISSKTKLPDG ALKFVLFITN YQNQMAFAQE TNVLPSTTKT LKNSYFQNIS SDASTQDRGR VISANQILAA EVLLPPIKNL DKLKQIIYQS LQEAMLAEKT IEQAIADAAS EWDKL
|
| |