Gene Tery_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1583 
Symbolalr 
ID4242732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2420398 
End bp2421585 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content40% 
IMG OID638106726 
Productalanine racemase 
Protein accessionYP_721336 
Protein GI113475275 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0787] Alanine racemase 
TIGRFAM ID[TIGR00492] alanine racemase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.545163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAGTA GAGAAAAGAC TTCTTTTAAG ACTCTAGCAC TAGAAAGTGA TGCTTATGGA 
GGTATTTGTC AAAGAGCATG GGTAGAAATT AATGATCGGG CATTGAGCTA TAATGTCCAA
CAACTTAAGA GTCTTTTATC AGCTAAAACT CAACTAATGG GAGTAGTAAA GGCAGATGCT
TATGGACATG GAGCGTCTAA GATCTCTAAA ACTATTTTAG AAGCTGGTGT AGATAGGTTG
GCAGTAGCCA CACTGCCAGA GGGAATAGAA TTAAGGTTAG CTGGAATTAA ACCACCAATT
TTAATTTTAG GAGCAATAGA CCGACCTGAA CAAATTCGGG CGATCGCTCA CTGGCAACTA
GAACCAACTA TTTGTACACC TCAACAAGCT TTAGTTTTTT CAGAAACTCT TTCCTACCAA
ACTGAACCAA TGCTAGTACA TCTTAAGTTG GATACAGGAA TGTCTCGTTT GGGAACACCT
TGGCAACAGG CGGTAGAATT TGTAAAATTT GTGCAGGGGT TACCAAATTT AAAAATTGCT
AGTATTTATT CCCACTTAGC GACGGCGGAT AACTTAGACC AAACGGTGAT GAAGCAGCAG
CATCAAAGGT TTGAGGAAGC AATAGGTCTT TGTGGTATTG GTGGAAAAAG TTTTTCTAGT
GATATACAAC TTCATTTAGC TAATTCGGCG GCGACGTTAA CTGACCCTGC TTTACACTAC
GATATGGTAC GAGTAGGTTT AGCTATTTAT GGCCTGTATC CGGCACCTCA TCTACAGGAT
AAAATTAATT TAAAGCCTGT TATGCAAGTA AAAGCTAGGG TGACACAAGT CAAAACTATT
GAAGCTGGTA CTGGTGTGAG TTATGGTTAT CAGTTTATTG CTCCAAAACA GATGCGTTTG
GCAGTGGTGG GTATTGGTTA TGCTGACGGT TTACCTCGTA ACCTTTCTAA TAGGATGAAA
GTCATTGTAC GCGATCGACT AATTCCTCAA GTAGGAGCTA TTACTATGGA TCAGTTGATG
TTAGATGTAA GTGCTATTCC TGATCTAGAA ACGGGTGAAG TGGTAACTTT GTTAGGGCAA
GTTGGTAAAC ATCAAATTTC TGCTGAAAAC TGGGCAAATA CTCTAGGAAC TATTTCTTGG
GAAATTCTTT GTGGTTTTAA AAATAGGTTG CCTCGGGTAG CAGTTTAG
 
Protein sequence
MLSREKTSFK TLALESDAYG GICQRAWVEI NDRALSYNVQ QLKSLLSAKT QLMGVVKADA 
YGHGASKISK TILEAGVDRL AVATLPEGIE LRLAGIKPPI LILGAIDRPE QIRAIAHWQL
EPTICTPQQA LVFSETLSYQ TEPMLVHLKL DTGMSRLGTP WQQAVEFVKF VQGLPNLKIA
SIYSHLATAD NLDQTVMKQQ HQRFEEAIGL CGIGGKSFSS DIQLHLANSA ATLTDPALHY
DMVRVGLAIY GLYPAPHLQD KINLKPVMQV KARVTQVKTI EAGTGVSYGY QFIAPKQMRL
AVVGIGYADG LPRNLSNRMK VIVRDRLIPQ VGAITMDQLM LDVSAIPDLE TGEVVTLLGQ
VGKHQISAEN WANTLGTISW EILCGFKNRL PRVAV