Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1583 |
Symbol | alr |
ID | 4242732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 2420398 |
End bp | 2421585 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638106726 |
Product | alanine racemase |
Protein accession | YP_721336 |
Protein GI | 113475275 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.545163 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAGTA GAGAAAAGAC TTCTTTTAAG ACTCTAGCAC TAGAAAGTGA TGCTTATGGA GGTATTTGTC AAAGAGCATG GGTAGAAATT AATGATCGGG CATTGAGCTA TAATGTCCAA CAACTTAAGA GTCTTTTATC AGCTAAAACT CAACTAATGG GAGTAGTAAA GGCAGATGCT TATGGACATG GAGCGTCTAA GATCTCTAAA ACTATTTTAG AAGCTGGTGT AGATAGGTTG GCAGTAGCCA CACTGCCAGA GGGAATAGAA TTAAGGTTAG CTGGAATTAA ACCACCAATT TTAATTTTAG GAGCAATAGA CCGACCTGAA CAAATTCGGG CGATCGCTCA CTGGCAACTA GAACCAACTA TTTGTACACC TCAACAAGCT TTAGTTTTTT CAGAAACTCT TTCCTACCAA ACTGAACCAA TGCTAGTACA TCTTAAGTTG GATACAGGAA TGTCTCGTTT GGGAACACCT TGGCAACAGG CGGTAGAATT TGTAAAATTT GTGCAGGGGT TACCAAATTT AAAAATTGCT AGTATTTATT CCCACTTAGC GACGGCGGAT AACTTAGACC AAACGGTGAT GAAGCAGCAG CATCAAAGGT TTGAGGAAGC AATAGGTCTT TGTGGTATTG GTGGAAAAAG TTTTTCTAGT GATATACAAC TTCATTTAGC TAATTCGGCG GCGACGTTAA CTGACCCTGC TTTACACTAC GATATGGTAC GAGTAGGTTT AGCTATTTAT GGCCTGTATC CGGCACCTCA TCTACAGGAT AAAATTAATT TAAAGCCTGT TATGCAAGTA AAAGCTAGGG TGACACAAGT CAAAACTATT GAAGCTGGTA CTGGTGTGAG TTATGGTTAT CAGTTTATTG CTCCAAAACA GATGCGTTTG GCAGTGGTGG GTATTGGTTA TGCTGACGGT TTACCTCGTA ACCTTTCTAA TAGGATGAAA GTCATTGTAC GCGATCGACT AATTCCTCAA GTAGGAGCTA TTACTATGGA TCAGTTGATG TTAGATGTAA GTGCTATTCC TGATCTAGAA ACGGGTGAAG TGGTAACTTT GTTAGGGCAA GTTGGTAAAC ATCAAATTTC TGCTGAAAAC TGGGCAAATA CTCTAGGAAC TATTTCTTGG GAAATTCTTT GTGGTTTTAA AAATAGGTTG CCTCGGGTAG CAGTTTAG
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Protein sequence | MLSREKTSFK TLALESDAYG GICQRAWVEI NDRALSYNVQ QLKSLLSAKT QLMGVVKADA YGHGASKISK TILEAGVDRL AVATLPEGIE LRLAGIKPPI LILGAIDRPE QIRAIAHWQL EPTICTPQQA LVFSETLSYQ TEPMLVHLKL DTGMSRLGTP WQQAVEFVKF VQGLPNLKIA SIYSHLATAD NLDQTVMKQQ HQRFEEAIGL CGIGGKSFSS DIQLHLANSA ATLTDPALHY DMVRVGLAIY GLYPAPHLQD KINLKPVMQV KARVTQVKTI EAGTGVSYGY QFIAPKQMRL AVVGIGYADG LPRNLSNRMK VIVRDRLIPQ VGAITMDQLM LDVSAIPDLE TGEVVTLLGQ VGKHQISAEN WANTLGTISW EILCGFKNRL PRVAV
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