| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1555 |
|---|
| Symbol | |
|---|
| ID | 4242034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 2374239 |
|---|
| End bp | 2375345 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638106698 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_721308 |
|---|
| Protein GI | 113475247 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00303] conserved hypothetical protein TIGR00303 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.97831 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGTG TTTATACCCA GAGACAACAG GGAAAAAATT GGCTCCAAAG GTATCAAGGC
TACAAACCAA TTTTTGGTTG TATTTTAGGA TTTACAGATA CAGGTCTAAT TCCAGGAATT
TCGGCAGCAG GAGCAACGCC ACAAGACCGC CAATATACTT GTTTAGCAGA TATAGAATTT
TTATATAACG GTCTACAACT ACAACCCCAA TATCCATTAC CTCCCCTTGA GGCTGGTGCT
TCCCCAGTCT TAATCACAAA AGCAATTATT GATACTCTCA ATATTCCTCT TTATTTATTT
AATGCTGGCT TATACCATAA ACCAACTGTT CCAACAATTG ATTTGGGAGG CGCTCCTGCT
CGTTGTTTAA CTTCTGGTCA TGCTTTAGAT CTGGCAACAA TTCAACATTT ACTAGAAGTA
GGTAGTTATT GGGGTCGGAA GTTAGCTGAT GAAGCAAAAG ATAGCTATGT GATTTTAGGA
GAATGTGTAG TTGGAGGAAC AACTACCGCT TTAGCAGTTT TATTAGGTTT GGGTATTGGC
GCTATTGGTA AAGTAAATAG CAGTCATCCT CAATGTAATC ATGATCAAAA ATTGGCTGTA
GTACATCAGG GTTTACAGGA GGCTGGCTTT CATTCGGCGC TTCCAGTGTC AGAACCTCTA
AAACTAGTCG CTGCAGTTGG AGACCCGATG CAAATAGTAG TAGCAGGAAT GGGAATGGCA
GCAAGTCTCA AGGTGGGGGT AATGTTAGCT GGTGGAACGC AAATGCTGGC TGTTTATGCT
TTAATGCAAG TATTGGCAGA AAAGTTATCT TTACTTTGGA GACCTGAGAA TATTGTGGTG
GGAACAACTC GTTGGGTTGC TGAAGATCCC ACGGGAGACA CCGTTGGGTT AGCACAAGAG
ATTGGTTGTG TACCTTTAAT GGCAACACAA CTTCATTTTG ATGAGTCTTG TTATCCTCAA
CTACAAGCTT ATGAAAGGGG ATATGTTAAG GAAGGAGTTG GCTGTGGAGG CTGCGCGATC
ACTGCTCATT TATATAGAAA TTGGAATCAA ACTCAATTAC TGAAAGCTGT TGAAGATTTG
TTTGCGTCTT TTATATTTCT TGAATAA
|
|---|
| Protein sequence | MIRVYTQRQQ GKNWLQRYQG YKPIFGCILG FTDTGLIPGI SAAGATPQDR QYTCLADIEF
LYNGLQLQPQ YPLPPLEAGA SPVLITKAII DTLNIPLYLF NAGLYHKPTV PTIDLGGAPA
RCLTSGHALD LATIQHLLEV GSYWGRKLAD EAKDSYVILG ECVVGGTTTA LAVLLGLGIG
AIGKVNSSHP QCNHDQKLAV VHQGLQEAGF HSALPVSEPL KLVAAVGDPM QIVVAGMGMA
ASLKVGVMLA GGTQMLAVYA LMQVLAEKLS LLWRPENIVV GTTRWVAEDP TGDTVGLAQE
IGCVPLMATQ LHFDESCYPQ LQAYERGYVK EGVGCGGCAI TAHLYRNWNQ TQLLKAVEDL
FASFIFLE
|
|---|
| |