| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1546 |
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| Symbol | |
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| ID | 4242025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 2353916 |
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| End bp | 2359255 |
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| Gene Length | 5340 bp |
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| Protein Length | 1779 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638106689 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_721299 |
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| Protein GI | 113475238 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.362162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAAC TTTTGCTCAT TAAAAAAATA CTTTTCAAAT TAGGGCGGAG TTTTCTCCAA
CTACTGCTTA TCGTTTTTGT TGGTTTGCCT CTGGCGGCGT TAATGTTGAT ATTTCCGTCG
TTGCGGCGGA GGTTGTTACC TAAAACTCAA AATGAAATTT ACGATCGCTT AAGTTCAACT
GTTGGTACTA GAGAAAAATT ACCAGATCAG CTTCTTTCTC AACTAGATTT TTTAATCCAA
GTATTGCGGG TAACTGCAGA AAGTAATGGT GACTCGAAGG TTGTCTACCC ATTCCTGCAG
CAAAACTTAG ATAAACTTGA TGATAACTTT GCTGATATAT TGCGAAACTG GGCAACTGCT
AATTTTTCTG AAGTGGAGGC GGATGTAGCA AAAAGCATTG CTATAGATAT TATTGACTTC
AGTTACAACA TTCAGGAATT TCCTCTGGGC AGCAAAGCAA ACAACATGGA AATTAGCATT
GCAGGTTATG AAGTAGTGCT AAAAGTTTTT ACATATAAGA GTCACCGGGA AAAGTGGGCA
ATGACTCAAA ATAATCTCGG CGTTGCCTAC AGTAAGAGAA TAAGGGGAGA CAAAGCCGAA
AATATTGAAG CCGCCATTGC TGCATACCAA CAAGCTTTGC TGGTGTACAC CCAAACTGAC
TTCCCCATCA ACTGGGCAAT GACTCAATAT AATCTCGGCA TTGCCTACAG TGACAGAATA
AGGGGAGACA AAGCCGAAAA TATTGAAGCC GCCATTGCTG CATACCAACA AGCTTTGCTG
GTGTACACCC AAACTGACTT CCCCATGGAC TGGGCAATGA CTCAAAATAA TCTCGGCATT
GCCTACAGAA ACAGAATAAG GGGAGACAAA GCCGAAAATA TTGAAGCCGC CATTGCTGCA
TACCAACAAG CTTTGCTGGT GCGCACCCAA ACTGACTTCC CCATGGACTG GGCAATGACT
CAAAATAATC TCGGCATTGC CTACAGAGAC AGAATAAGGG GAGACAAAGC CCAAAATATT
GAAGCCGCCA TTGCTGCATA CCAACAAGCT TTGCTGGTGT ACACCCAAAC TGACTTCCCC
ATGGACTGGG CAAGAACTCA AAATAATCTC GGCATTGCCT ACAGAGACAG AATAAGGGGA
GACAAAGCCC AAAATATTGA AGCCGCCATT GCTGCATACC AACAAGCTTT GCTGGTGTAC
ACCCAAACAG ACTTCCCCAT CAACTGGGCA ATGACTCAAT ATAATCTCGG CATTGCCTAC
AGTGACAGAA TAAGGGGAGA CAAAGCCGAA AATATTGAAG CCGCCATTGC TGCATACCAA
CAAGCTTTGC TGGTGTACAC CCAAACAGAC TTCCCCATGG ACTGGGCAAT GACTCAAAAT
AATCTCGGCA TTGCCTACAG AGACAGAATA AGGGGAGACA AAGCCCAAAA TATTGAAGCC
GCCATTGCTG CATACCAACA AGCTTTGCTG GTGTACACCC AAACAGACTT CCCCATGGAC
TGGGCAATGA CTCAAAATAA TCTCGGCATT GCCTACAGAG ACAGAATAAG GGGAGACAAA
GCCCAAAATA TTGAAGCCGC CATTGCTGCA TACCAACAAG CTTTGCTGGT GTACACCCAA
ACAGACTTCC CCATCAACTG GGCAATGACT CAATATAATC TCGGCATTGC CTACAGTGAC
AGAATAAGGG GAGACAAAGC CGAAAATATT GAAGCCGCCA TTGCTGCATA CCAACAAGCT
TTGCTGGTGT ACACCCAAAC TGACTTCCCC ATGGACTGGG CAATGACTCA AAATAATCTC
GGCATTGCCT ACAGAAACAG AATAAGGGGA GACAAAGCCG AAAATATTGA AGCCGCCATT
GCTGCATACC AACAAGCTTT GCTGGTGCGC ACCCAAACTG ACTTCCCCAT GGACTGGGCA
ATGACTCAAA ATAATCTCGG CAATGCCTAC AGAGACAGAA TAAGGGGAGA CAAAGCGGAA
AATATTGAAG CTGCCATTGC TGCATACCAA CAAGCTTTGC TGGTGCGCAC CCAAACAGAC
TTCCCCATGG ACTGGGCAAT GACTCAAAAT AATCTCGGCA TTGCCTACAG TGACAGAATA
AGGGGAGACA AAGCCGAAAA TATTGAAGCC GCCATTGCTG CATTCCAACA AGCTTTGCTG
GTGCGCACCC AAACAGACTT CCCCATCAAC TGGGCAACAA CTCAAAATAA TCTCGGCCTT
GCCTACAGTG ACAGAATAAG GGGAGACAAA GCCGAAAATA TTGAAGCTGC CATTGCTGCA
TACCAACAAG CTTTGCTGGT GCGCACCCAA ACAGACTTCC CCATGGACTG GGCAATGACT
CAAAATAATC TCGGCATTGC CTACAGTGAC AGAATAAGGG GAGACAAAGC CGAAAATATT
GAAGCCGCCA TTGCTGCATT CCAACAAGCT TTGCTGGTGC GCACCCAAAC AGACTTCCCC
ATCAACTGGG CAACAACTCA AAATAATCTC GGCCTTGCCT ACAGTGACAG AATAAGGGGA
GACAAAGCCG AAAATATTGA AGCTGCCATT GCTGCATTCC AACAAGCTTT GCTGGTGTAC
ACCCAAACTG ACTTCCCCAT GGACTGGGCA ATGACTCAAA ATAATCTCGG CAATGCCTAC
AGAGACAGAA TAAGGGGAGA CAAAGCCGAA AATATTGAAG CCGCCATTGC TGCATGCCAA
CAAGCTTTGC TGGTGTACAC CCAAACAGAC TTCCCCATGG ACTGGGCAAT GACTCAAAAT
AATCTCGGCA TTGCCTACAG AAACAGAATA AGGGGAGACA AAGCCGAAAA TATTGAAGCC
GCCATTGCTG CATACCAACA AGCTTTGCTG GTGCGCACCC AAACTGACTT CCCCATGGAC
TGGGCAATGA CTCAAAATAA TCTCGGCAAT GCCTACAGTG ACAGAATAAG GGGAGACAAA
GCCCAAAATA TTGAAGCCGC CATTGCTGCA TGCCAACAAG CTTTGCTGGT GCGCACCCAA
ACAGACTTCC CCATGGACTG GGCAATGACT CAAAATAATC TCGGCAATGC CTACAGTGAC
AGAATAAGGG GAGACAAAGC CCAAAATATT GAAGCCGCCA TTGCTGCATG CCAACAAGCT
TTGCTGGTGT ACACCCAAAC AGACTTCCCC ATGGACTGGG CAGGAACTCA AAATAATCTC
GGCATTGCCT ACAGTGACAG AATAAGGGGA GACAAAGCCG AAAATATTGA AGCCGCCATT
GCTGCATTCC AACAAGCTTT GCTGGTGTGC ACCCAAACTG ACTTCCCCAT CAACTGGGCA
GCAACTCAAA ATAATCTCGG CATTGCCTAC AGAAACAGAA TAAGGGGAGA CAAAGCCCAA
AATATTGAAG CTGCCATTGC TGCATACCAA CAAGCTTTGC TGGTGCGCAC CCAAACTGAC
TTCCCCATCG ACTGGGCAAT GACTCAAAAT AATCTCGGCA ATGCCTACAG TGACAGAATA
AGGGGAGACA AAGCCCAAAA TATTGAAGCC GCCATTGCTG CATACGAACA AGCTTTGCTG
GTGCGCACCC TAGAAGCAGA CCCCATCACC CATCTAAAAA CCACCAGCAA CCTAGGCGAC
CTATATTTCG ACAACCAAAA CTGGCAACTC GCCGCCGACA ACTATAAAAA AGCCATAACC
GCAGTGGAAC TCACCCGCAG TTGGGCAACC ACCGACGATC GCCGCCAGGA AATACTCAAA
GAAAACATCA ATATCTATAA CAAAGCCATC CAAGCATACA TACACCTAAA AAAGTTAGAA
CAAGCACTAG AAATAGCCGA GCGCAGTCAA GCCCGAAACC TAGTCCAACT CCTCACCAAC
CGCGACTTAG TTCCTCAAGA CAATGTACCC CCAGAAATAA CCCAACAACT TCAACAACAA
CAAAAAGAAA TTCGCGTCAA CAAAGGAGAA CTAGAGAAAG TCAGAAAACA ACTATCACAG
CAAAACACAC AAGAAAAAAC ATCATTAGAA AAATCTGAGA AACAGCTAAA CGAAGAATTA
CAGAAACTCA GACAGCAGTT AGAAAAAACA TTTAATCAAA TTCAGGAATA CGACCCCACC
TTCCGCCTGA CCCAGGAAGT GCAACCAATA GCTTTTAGAG AAATTCAGCA ACTTGCCACA
GAACAGCAGA CAGCAATTAT TGAGTGGTAT ATTATGGGAG AAAAATTCCT AGCATTTACC
CTAGTTCCCC CAACCTCAAC AGCAACATCA GAATTATTTA TGTGGCAGTC TACCGAAGAC
GGCTTAAAAA ATTTACAGGA GTGGGCACAA GAATATGTAG ATAAATATTA TGAACTTAAA
ATAGCACATC AAGAAAATCA GGAAAAAGCC AAAAAATTAC AACAAGAATG GGAGACAAAA
ATAACAACTC GCCTAGAAAA ACTAGGAGAA ATTTTACATA TAAAAGAAAT ACTCCAACCC
ATCCTCGAAA GTGAATGTCA AAGACTGACC TTAATTCCCC ATTCATTCCT ACATTTTCTC
CCCCTTCATA TCTTACCCAT TAATAACCCA GAAAATAGTC AAGAAAACCC AGAAAAAAAA
TATCTCCAGG ATTATTTTAA CCAGGGAGTA AGCTATGCTC CAAGCTGCCA AATATTGCAA
AAAGTTAGAG AACGAAACAA CCAAGAATTT CAGAGTTTAT TTGCCATTCA AACCCCCACC
CCAGATTTAT ACGGGCAAGA CTTAGGCATT ATTTCAATAA TCAAAAAACA ATTTAATAAT
GTGGAAATAA TCCCAAAAAA TCAAGCCACA AAATCAGCAT TAATTAACGA TTCCAAATTA
TCCCTTGCTA ACTCGGTATT ATTCTTCTGT CACGGAGTAT TTGAACCTTT TTCTCCCCTA
GATTCAGGAT TAATATTAGC CGATGAAAAA CTCACATTAG GAGATATTAT TCAAAACCTA
AATTTAAGCA AATGTCGCCT AGTAACCCTA GCCGCTTGCG AAACAGGATT AACAGATATC
TTAAATCAAG AATATGTAGG TTTACCCAGC GGTTTTCTCC TAGCAGGAAG TACAAATATT
ATTGCCAGTC TTTGGAGTGT GAGAGTTGAT GCAACAGCGT TATTAATGTT AAGATTATAT
CAAGAATTAA AAAAATATGA TAATATAATA ATAGCCTTAA AAATAGCCCA AAACTGGTTA
AGAGATACAA AGGTGCAAGA ATTGAAAGAG TGGGTCATAA AGTCCCCTCT AAAAATTATT
TGGCAAGAAA AATTAGAAGA AACATTTACT AAAATGGAAA ATCTAGAAGG AGTCAATTGT
AAACCATATA ACTCACCTTA TTTTTGGGCT GGTTTTTGTG TTGTCGGAAA AGGAGAATAA
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| Protein sequence | MQQLLLIKKI LFKLGRSFLQ LLLIVFVGLP LAALMLIFPS LRRRLLPKTQ NEIYDRLSST
VGTREKLPDQ LLSQLDFLIQ VLRVTAESNG DSKVVYPFLQ QNLDKLDDNF ADILRNWATA
NFSEVEADVA KSIAIDIIDF SYNIQEFPLG SKANNMEISI AGYEVVLKVF TYKSHREKWA
MTQNNLGVAY SKRIRGDKAE NIEAAIAAYQ QALLVYTQTD FPINWAMTQY NLGIAYSDRI
RGDKAENIEA AIAAYQQALL VYTQTDFPMD WAMTQNNLGI AYRNRIRGDK AENIEAAIAA
YQQALLVRTQ TDFPMDWAMT QNNLGIAYRD RIRGDKAQNI EAAIAAYQQA LLVYTQTDFP
MDWARTQNNL GIAYRDRIRG DKAQNIEAAI AAYQQALLVY TQTDFPINWA MTQYNLGIAY
SDRIRGDKAE NIEAAIAAYQ QALLVYTQTD FPMDWAMTQN NLGIAYRDRI RGDKAQNIEA
AIAAYQQALL VYTQTDFPMD WAMTQNNLGI AYRDRIRGDK AQNIEAAIAA YQQALLVYTQ
TDFPINWAMT QYNLGIAYSD RIRGDKAENI EAAIAAYQQA LLVYTQTDFP MDWAMTQNNL
GIAYRNRIRG DKAENIEAAI AAYQQALLVR TQTDFPMDWA MTQNNLGNAY RDRIRGDKAE
NIEAAIAAYQ QALLVRTQTD FPMDWAMTQN NLGIAYSDRI RGDKAENIEA AIAAFQQALL
VRTQTDFPIN WATTQNNLGL AYSDRIRGDK AENIEAAIAA YQQALLVRTQ TDFPMDWAMT
QNNLGIAYSD RIRGDKAENI EAAIAAFQQA LLVRTQTDFP INWATTQNNL GLAYSDRIRG
DKAENIEAAI AAFQQALLVY TQTDFPMDWA MTQNNLGNAY RDRIRGDKAE NIEAAIAACQ
QALLVYTQTD FPMDWAMTQN NLGIAYRNRI RGDKAENIEA AIAAYQQALL VRTQTDFPMD
WAMTQNNLGN AYSDRIRGDK AQNIEAAIAA CQQALLVRTQ TDFPMDWAMT QNNLGNAYSD
RIRGDKAQNI EAAIAACQQA LLVYTQTDFP MDWAGTQNNL GIAYSDRIRG DKAENIEAAI
AAFQQALLVC TQTDFPINWA ATQNNLGIAY RNRIRGDKAQ NIEAAIAAYQ QALLVRTQTD
FPIDWAMTQN NLGNAYSDRI RGDKAQNIEA AIAAYEQALL VRTLEADPIT HLKTTSNLGD
LYFDNQNWQL AADNYKKAIT AVELTRSWAT TDDRRQEILK ENINIYNKAI QAYIHLKKLE
QALEIAERSQ ARNLVQLLTN RDLVPQDNVP PEITQQLQQQ QKEIRVNKGE LEKVRKQLSQ
QNTQEKTSLE KSEKQLNEEL QKLRQQLEKT FNQIQEYDPT FRLTQEVQPI AFREIQQLAT
EQQTAIIEWY IMGEKFLAFT LVPPTSTATS ELFMWQSTED GLKNLQEWAQ EYVDKYYELK
IAHQENQEKA KKLQQEWETK ITTRLEKLGE ILHIKEILQP ILESECQRLT LIPHSFLHFL
PLHILPINNP ENSQENPEKK YLQDYFNQGV SYAPSCQILQ KVRERNNQEF QSLFAIQTPT
PDLYGQDLGI ISIIKKQFNN VEIIPKNQAT KSALINDSKL SLANSVLFFC HGVFEPFSPL
DSGLILADEK LTLGDIIQNL NLSKCRLVTL AACETGLTDI LNQEYVGLPS GFLLAGSTNI
IASLWSVRVD ATALLMLRLY QELKKYDNII IALKIAQNWL RDTKVQELKE WVIKSPLKII
WQEKLEETFT KMENLEGVNC KPYNSPYFWA GFCVVGKGE
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