Gene Tery_1538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1538 
Symbol 
ID4242017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2335843 
End bp2336226 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content29% 
IMG OID638106682 
Productglycosyltransferase 
Protein accessionYP_721292 
Protein GI113475231 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.606997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.279652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGGAT GCAGCATGTT AATCAACATG AATAACTTTG AAAAATGCCC TGAGTTTGAT 
GAGGATTATT TTTTATACTA CGAGGATTTT GACTTTTGTA GACGCTATAA AAAACAAGGT
CATAAAATAG CTATTACTCA AACAATATCT GTAATTCATC AACCATCTTC TATTACTAGT
AAACAACCAG GATTAAAACT TGAGTATAGC ATATATAGCT ACCTGTTGAG TTTAGCAAAA
CATACAAATA AATTAGTTTT AATATATAGA TTACTTAGAA TTACAATAGC TGCTTTAGTT
AGCCTACTAA TAGATTATAA AATAGCTCGT GTTAAAATCA AAGCGATATC GAAATTTATC
AGATGTAATC GTAGGTTTTT GTAG
 
Protein sequence
MTGCSMLINM NNFEKCPEFD EDYFLYYEDF DFCRRYKKQG HKIAITQTIS VIHQPSSITS 
KQPGLKLEYS IYSYLLSLAK HTNKLVLIYR LLRITIAALV SLLIDYKIAR VKIKAISKFI
RCNRRFL