| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1533 |
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| Symbol | |
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| ID | 4241720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 2324538 |
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| End bp | 2326616 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638106677 |
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| Product | polypeptide-transport-associated, ShlB-type |
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| Protein accession | YP_721287 |
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| Protein GI | 113475226 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0363151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0767157 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAAGA TTATCACATT AATTTCTAGT ACATTTATAA TTATTTCCTT ATTGGATAAT
CAAGCTATCT CCAAAACTAC TGATGTTGAT AAATTATTGA ATCAAACTTC ACTAACCACT
AACAAAAAAA ATATTTCATC ATTCAAAAAA TATAAATTAA CATCAGCATT AAGTTCTCAA
TTGATTGACA AATCTGGACA GAAAAAAGTT AATTACAAAA GTTTAATATC TCAATTAAAA
AAAATAGAAA AAATAAAATT AATCCCAGAT TTAAAAGTTT ATCCTATAGA AAAAAACATC
ACACAAACTT TACCCAATAG TCAGCAAATA CTTACTTCCT TTGAAATTAT TAATACTTTA
AATACCAGCC AACCAAAATA TACTCAAAAG ACTCAAAATC CACCAAGACC ACCAGAATCA
CTAGAAAATC CCCGACCAGA TCCAAATCGC GATCGCTTCC TCCAACCCCT TCCCCAACCA
ACCATACCAG AAATTCCCAA AGATAAGGAA CTAAAAAAAA CACCACCACC TCAACCTCTA
CGACAAGACC AAAAGCAACT AAATCAGAAA ATTCCCGTGC AGAGAGTTTT AGTAAATGGA
AGTACAATTT TTACCCCACA AGAAATTAAG ACTCTTGTTG AACCATATGA AGGGCGTAAG
GCTACTCTAT TAGAACTTCA GCAACTAGCA GATAAAATTA CCGAAATCTA TCTAGAACTT
GGCTATATTA CCTCAAGAGC AATTCTACCT CCCCAAAACA TTAGGGAGGG AGTAGTTAGG
ATTGAAATTA TAGAGGGCAT TTTAGGAGAA ATCAAAATTG AAGGTACAAA AAGATTACAC
AATTCCTATA TAGCAAGTCG GATACAACTT GGGGCGGGAA AACCATTGGA CACCGGTAGA
CTAGAAAATC AATTACGGTT ACTTCGGGCG AATCCTTTAT TTGAAAATAT TGAAGCTAGT
TTGCAAACTA GTGAAACCCT AGGGGAAAGT ATTCTTATTG TTCGTATCAA AGAAAAAAAT
CCCTTAGAGT TGAGTATGAA TACTGATAAC TATTCTAATC CCAGCGTAGG TTCTGAACGA
ACTGGTTGGA CTGCACTACA TCGTAACCTA ACTGGGAGAG GCGATTTTTT TGTGGCATCT
TATAACACTA CTAGGCTATT TGACGATGAA TCAGATGTTT TTGACTTTAT TTATAATTTG
CCTATTAACT CCATGAATGG TACTTTGCAG GCAAGAGTTG CCCCTAACAG TAATAGAGTT
GGCCAAGATT TTGAAGATAT TGAAATTAGT AGCACAACAG ATGTATATGA ATTGAGTTAC
CGTCAACCTA TATTGAGAAA ACCGAAACAA GAATTTGCCT TGTCTCTCGG TTTGAGTTAT
CAGCGCACAA AAACTTTCCT CAACGATGAA CCTTTTAATT TTACAGCAGA TACAGATAAC
ACTGATAATG ATGGTATTAA TAGTACTACT GTGATTAGAT TGGGACAGGA TTATATTCTC
CGAGATCCTC AAGGTGCTTG GGCTTTGCGA TCGCAATTCA ATATTGGTAC TGGTTTATTT
GATGCTACTG TCAGGAAGGA TTCACAACCT GATGGACATT TCTTGAATTG GCTAGGCCAA
GTACAAAGAG TACAAAGATT AAGTAGTAAT CATTTATTGA TTGTCCAGGG AGATTTGCAA
TTGTCCTCAA CTAGTTTATT GCCATATCAA CAATTTATTA TTGGTGGTGC TTTGTCCTTA
CGAGGCTATC AGCAGAATGT CAGGTCTGGA GATAATGGTT TTAGATTTTC TATTGAGGAC
AGAATTACAG TTTATCGAGA TGAGTCTGGT TTGCCATTGA TACAGTTTAC TCCTTTTCTA
GATATTGGAG CTGTTTGGGA TGATAGTAGT AATCCTAATA GTGACTCAAA ACCCAACCAA
AGATTTTTGG CTGGAGCTGG AATAGGTTTG ATTTGGCAAC TTGTGCCACA AGTCGATCTA
CGCTTAGACT ATGGTTTACC TTTGGTGCAC TTAGATGATC GTAGCAATAA TGCTCAGGAT
TCCGGATTTT ATTTCAGTGT AATTGTTCGG CCGTTCTGA
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| Protein sequence | MLKIITLISS TFIIISLLDN QAISKTTDVD KLLNQTSLTT NKKNISSFKK YKLTSALSSQ
LIDKSGQKKV NYKSLISQLK KIEKIKLIPD LKVYPIEKNI TQTLPNSQQI LTSFEIINTL
NTSQPKYTQK TQNPPRPPES LENPRPDPNR DRFLQPLPQP TIPEIPKDKE LKKTPPPQPL
RQDQKQLNQK IPVQRVLVNG STIFTPQEIK TLVEPYEGRK ATLLELQQLA DKITEIYLEL
GYITSRAILP PQNIREGVVR IEIIEGILGE IKIEGTKRLH NSYIASRIQL GAGKPLDTGR
LENQLRLLRA NPLFENIEAS LQTSETLGES ILIVRIKEKN PLELSMNTDN YSNPSVGSER
TGWTALHRNL TGRGDFFVAS YNTTRLFDDE SDVFDFIYNL PINSMNGTLQ ARVAPNSNRV
GQDFEDIEIS STTDVYELSY RQPILRKPKQ EFALSLGLSY QRTKTFLNDE PFNFTADTDN
TDNDGINSTT VIRLGQDYIL RDPQGAWALR SQFNIGTGLF DATVRKDSQP DGHFLNWLGQ
VQRVQRLSSN HLLIVQGDLQ LSSTSLLPYQ QFIIGGALSL RGYQQNVRSG DNGFRFSIED
RITVYRDESG LPLIQFTPFL DIGAVWDDSS NPNSDSKPNQ RFLAGAGIGL IWQLVPQVDL
RLDYGLPLVH LDDRSNNAQD SGFYFSVIVR PF
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