Gene Tery_1499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1499 
Symbol 
ID4242959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2281661 
End bp2283121 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content34% 
IMG OID638106648 
ProductTPR repeat-containing protein 
Protein accessionYP_721258 
Protein GI113475197 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.329638 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAA CAGCAACAGA AACCAGTGTT AACTATCTTC ATATTGGGAA TAAATTATTA 
AGGCAAGGTA ACTTCCCTGA AGCTGCTGAT GCTTATCGCC AAGTCATTAA ACTTAACCCC
AAATCAGCAG TAGGTCATCA AAACCTAGGA GAAGCTCTCA GTTTACAGGG AAATTTAGAA
GAGGCAGCAA ATATCTATTA TCAAGGAATT CAACTACAGA AAAATTATCC CTGGTCTTAC
TATAATTTAG GAGAAATTCT GATTAAACTT GAGAGGTTTG ATGAAGCAGT TATTTATCTA
CGTCAAGCTA TTGAACTTAA TCCAGATTTT TCCAATTTTC ATCATAGTTT AGGCTTAGCT
TTGTCAAAAA AAGGATTATT TGATGAGGCG ATAGTTACTT ATCGTCGCGC TATTGAAATA
GACCCAAATG CAATTTTAAC TTATCAATAT TTAGGTGAAG TATTAGCATG TAAAAAACAG
TATGATGAAG CCATAGAAAG TTTTAATCAA GCTATTGGAA TTAATCCCTA TTTATCAGAA
TATCATTTAG GTTTAGCTAA AGTTCTACAA AACGCTGGTC AAATAGAAAA AGCAATCAAT
TCTTGCCATC ACGCTCTTGA ATTAAACCCA AACTTAGCTG AAGCTTACTA TTACATTGGC
TTAGGTTTTA CTAAGTTACA AAAGTGGGAA GAAGCTATTG ATAGCTTATT GCAAGCTATT
TCTCTAAATT TTAAAAATGC AGAAGTCTAT CATCATTTAG GAGCAGCTTT AGCACAATTA
CAACGTTGGG AAGAAGCGGT TGCTGCCTAT AAAAATGGAC TTGAATTTAA TCCTAATTCT
GCAATAATTC ATCATCAATT AGCTTATGCT TTAGCCCAAA TAAAACAGTG GGAGGAAGCT
GTAAAAGAAT ATCGTGAAGT TCTCATAATT AATCCTAATT CTGCAGTAGT TTATGACCAG
TTAGGAGAAG CACTAACAGA AATACAAAAG TGGGAAGAAG CTATAGATTG TTATCAGAAA
GCTGTGAAAA TTAAGCCAGA CAATCAAAAG TTTAACCAAC ATCTACAGGA AGCATTGACA
AGAAGACAAG AAAAGAATAA AACTACTATA GAGTCTCATC TTAAATTGGC AGAAATGATG
GAAAAACAAG GATTTGCTAA TGAGGCTATT TCTGCTTATC GTCGAGTGGT AAGTCTTAAT
CCTACTGCTG CTGATTTACA TCATAAATTA GGGTATGCTT TGGCTACTTC AGAAAGGTGG
GATGAAGCTG TCGCTCCTTA TCGTCAGGCA ATTAAACTTA ACCCAAATTC AGGTGTTGTA
TATTATCATT TAGGCATAGC TTTATCATAC TTAGGTTTAG ATGAAGAAGC AATATCTTCC
CTAGAAAAAG CAATTCAGCT TAAACCGGAT TTATCTAGCG CCCATCAAGC TTTAGAAAAA
CTACAAGTAA AATCAAAGTA A
 
Protein sequence
MTTTATETSV NYLHIGNKLL RQGNFPEAAD AYRQVIKLNP KSAVGHQNLG EALSLQGNLE 
EAANIYYQGI QLQKNYPWSY YNLGEILIKL ERFDEAVIYL RQAIELNPDF SNFHHSLGLA
LSKKGLFDEA IVTYRRAIEI DPNAILTYQY LGEVLACKKQ YDEAIESFNQ AIGINPYLSE
YHLGLAKVLQ NAGQIEKAIN SCHHALELNP NLAEAYYYIG LGFTKLQKWE EAIDSLLQAI
SLNFKNAEVY HHLGAALAQL QRWEEAVAAY KNGLEFNPNS AIIHHQLAYA LAQIKQWEEA
VKEYREVLII NPNSAVVYDQ LGEALTEIQK WEEAIDCYQK AVKIKPDNQK FNQHLQEALT
RRQEKNKTTI ESHLKLAEMM EKQGFANEAI SAYRRVVSLN PTAADLHHKL GYALATSERW
DEAVAPYRQA IKLNPNSGVV YYHLGIALSY LGLDEEAISS LEKAIQLKPD LSSAHQALEK
LQVKSK