| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1499 |
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| Symbol | |
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| ID | 4242959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 2281661 |
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| End bp | 2283121 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 638106648 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_721258 |
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| Protein GI | 113475197 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.329638 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAA CAGCAACAGA AACCAGTGTT AACTATCTTC ATATTGGGAA TAAATTATTA
AGGCAAGGTA ACTTCCCTGA AGCTGCTGAT GCTTATCGCC AAGTCATTAA ACTTAACCCC
AAATCAGCAG TAGGTCATCA AAACCTAGGA GAAGCTCTCA GTTTACAGGG AAATTTAGAA
GAGGCAGCAA ATATCTATTA TCAAGGAATT CAACTACAGA AAAATTATCC CTGGTCTTAC
TATAATTTAG GAGAAATTCT GATTAAACTT GAGAGGTTTG ATGAAGCAGT TATTTATCTA
CGTCAAGCTA TTGAACTTAA TCCAGATTTT TCCAATTTTC ATCATAGTTT AGGCTTAGCT
TTGTCAAAAA AAGGATTATT TGATGAGGCG ATAGTTACTT ATCGTCGCGC TATTGAAATA
GACCCAAATG CAATTTTAAC TTATCAATAT TTAGGTGAAG TATTAGCATG TAAAAAACAG
TATGATGAAG CCATAGAAAG TTTTAATCAA GCTATTGGAA TTAATCCCTA TTTATCAGAA
TATCATTTAG GTTTAGCTAA AGTTCTACAA AACGCTGGTC AAATAGAAAA AGCAATCAAT
TCTTGCCATC ACGCTCTTGA ATTAAACCCA AACTTAGCTG AAGCTTACTA TTACATTGGC
TTAGGTTTTA CTAAGTTACA AAAGTGGGAA GAAGCTATTG ATAGCTTATT GCAAGCTATT
TCTCTAAATT TTAAAAATGC AGAAGTCTAT CATCATTTAG GAGCAGCTTT AGCACAATTA
CAACGTTGGG AAGAAGCGGT TGCTGCCTAT AAAAATGGAC TTGAATTTAA TCCTAATTCT
GCAATAATTC ATCATCAATT AGCTTATGCT TTAGCCCAAA TAAAACAGTG GGAGGAAGCT
GTAAAAGAAT ATCGTGAAGT TCTCATAATT AATCCTAATT CTGCAGTAGT TTATGACCAG
TTAGGAGAAG CACTAACAGA AATACAAAAG TGGGAAGAAG CTATAGATTG TTATCAGAAA
GCTGTGAAAA TTAAGCCAGA CAATCAAAAG TTTAACCAAC ATCTACAGGA AGCATTGACA
AGAAGACAAG AAAAGAATAA AACTACTATA GAGTCTCATC TTAAATTGGC AGAAATGATG
GAAAAACAAG GATTTGCTAA TGAGGCTATT TCTGCTTATC GTCGAGTGGT AAGTCTTAAT
CCTACTGCTG CTGATTTACA TCATAAATTA GGGTATGCTT TGGCTACTTC AGAAAGGTGG
GATGAAGCTG TCGCTCCTTA TCGTCAGGCA ATTAAACTTA ACCCAAATTC AGGTGTTGTA
TATTATCATT TAGGCATAGC TTTATCATAC TTAGGTTTAG ATGAAGAAGC AATATCTTCC
CTAGAAAAAG CAATTCAGCT TAAACCGGAT TTATCTAGCG CCCATCAAGC TTTAGAAAAA
CTACAAGTAA AATCAAAGTA A
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| Protein sequence | MTTTATETSV NYLHIGNKLL RQGNFPEAAD AYRQVIKLNP KSAVGHQNLG EALSLQGNLE
EAANIYYQGI QLQKNYPWSY YNLGEILIKL ERFDEAVIYL RQAIELNPDF SNFHHSLGLA
LSKKGLFDEA IVTYRRAIEI DPNAILTYQY LGEVLACKKQ YDEAIESFNQ AIGINPYLSE
YHLGLAKVLQ NAGQIEKAIN SCHHALELNP NLAEAYYYIG LGFTKLQKWE EAIDSLLQAI
SLNFKNAEVY HHLGAALAQL QRWEEAVAAY KNGLEFNPNS AIIHHQLAYA LAQIKQWEEA
VKEYREVLII NPNSAVVYDQ LGEALTEIQK WEEAIDCYQK AVKIKPDNQK FNQHLQEALT
RRQEKNKTTI ESHLKLAEMM EKQGFANEAI SAYRRVVSLN PTAADLHHKL GYALATSERW
DEAVAPYRQA IKLNPNSGVV YYHLGIALSY LGLDEEAISS LEKAIQLKPD LSSAHQALEK
LQVKSK
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