Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1487 |
Symbol | |
ID | 4243062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 2258640 |
End bp | 2260478 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638106638 |
Product | hypothetical protein |
Protein accession | YP_721248 |
Protein GI | 113475187 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.155279 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGAATGA ATGTATTTGT ATTATGTACG CCTAGGTCTA GTTCTTACAC TTTTGCTAAA GCTTGCACCT ATATATCTAA TTATAGAGTA GCCCATGAAT CAAACAGTGG ATTGTTAGGA AAAAAAAGGG TAGTATATCC AGAAAATCAT ATAGAAGTAG ATAATCGTTT GGCTTGGTTT TTGGGTTATT TAGATGAGCT ATATGGAGAT AATGCTTTTT ACGTTCATTT AATTAGAAAT AAACAGAAAA CTGCTATTAG TATTAACAAG CGATGGAATT TGCCAGCAAG TATTATTAAT GCTTATGGAC GAGCTATTTT AGTGAGAGGC GATCGCCAAC TTGAGAATGA CCTAGAAGTT TGTGAAGATT ATTATGAGAC AGTAACAAAA AATATTCAAT TATTTTTGAA AGACAAATCT CACAAAATTG TATTTAAGGT CGAAAATGCT CAAGAAAATT TTAGAGAGTT TTGGCAAAAA ATAGGTGCTA AAGGTAATTT AGAATTAGCT TTAGAAACCT GGGATAGAAA ACACAATGCT TCCCCCAAAA ATCAAGATAG TATTCAAGTA AGGAAAATGA AAGAAAAAGC TTTAGTAGAA ATTAGTAATG TGAGCTTTGG GGCAAATTTT CCAGAGTTTA TCCAACAAGA ATTTAGAGGA TGTAATATAG ATTCACTAAA AAAAGGAGAC CGTTTGAATA CCTATTTTCT ACCTATAATA GGTTGGGTTC TAGGCCAAAA GTATCAGGTA GTTACAGTAG AAGTAGTCAG TGAGGGTATA GTTGTAGAAA CAGTCCCAGT GGATATAGCT CGTCCAGGAG TAAGCAAACA ATTCCCCGAA ATACCAGCAG CTAAAAATAG TGGTTTTAGC ATCAGGGTAG GACTACTGGG TCTGCCAATG GCATCTGAAC TAACTTTACA AGCAGTTCTG GAAAATGGTA GTCGCTTTCC CTTGGGAAAT ATCAAATTTC GACGCTTGCA GGGGTTAAAG TCTTGGTACA GTCCAAAGAT ACAACCTCTG GCTATATCAT CTATTGGACC TTCGGGTGCC GAACAGCTAT TGCAACTTTT GGTGGGACAT CCATCTCTGG TAGGAATAAG TGAGTCAACT AATGATACTC CACCTAGTTA TTATTGGTTA AAGTTGTTGG CTGAGTTATC GTCAGAAAAT GGAATTTTTG ATGCTAGTAC TCAGAGAAAT TTGAGGAGCA AGGAACAACG GTTCAAACTA TCAAACTTAT CTTTTTGGAG AGAGCAAACT TATCCAGAAA ATTTAGGAAG CTTCTGTCTG GAAAGTATTG ATGGTTTCTA TTCAAATGTT CAAGCTGAAG CATCAGAAAT TACTTATTTT GTAGAAAGAT ATGATATTTC CCGTCCTAAA TTTTTAAATC TTTTATCCGA ATTATATCCA GAGGGTAAGG AAATTATTTT GGTTCGTGAT TTTCGAGATG TAGTTTACTC TATGCTACCT TTTAGCGGGC GTAAATGTGC GGGTTTTGAT TCAAAAAAAT TTAAGAGTTA TCAACAGTTT GTCTATCATT TTGGCAAATA TTCTGTTGGT AGTTTACTTG CCAGATGGAA GGAGCGATCG CCTCACATTT ATTTTGTAAA ATACGAGGAT TTAATTTTAT CTCCAGAACC AACTTTAAGG GGGATTTTGG AATATTTAAG TGTTAATAGT TCTCAGGAAG TTATTAATAC TATGTTGAAA AAAATAACAA AAAATAACTC GAAACCAGAG GCATTACTGG GAGACTGGCA GTATGAAATG CCAGCTTCTT TGCAAGTTTT ATGTAGCGAA GTATGCGAAG CAGCTTTGCA AGAATTTGGT TATAGCTAA
|
Protein sequence | MGMNVFVLCT PRSSSYTFAK ACTYISNYRV AHESNSGLLG KKRVVYPENH IEVDNRLAWF LGYLDELYGD NAFYVHLIRN KQKTAISINK RWNLPASIIN AYGRAILVRG DRQLENDLEV CEDYYETVTK NIQLFLKDKS HKIVFKVENA QENFREFWQK IGAKGNLELA LETWDRKHNA SPKNQDSIQV RKMKEKALVE ISNVSFGANF PEFIQQEFRG CNIDSLKKGD RLNTYFLPII GWVLGQKYQV VTVEVVSEGI VVETVPVDIA RPGVSKQFPE IPAAKNSGFS IRVGLLGLPM ASELTLQAVL ENGSRFPLGN IKFRRLQGLK SWYSPKIQPL AISSIGPSGA EQLLQLLVGH PSLVGISEST NDTPPSYYWL KLLAELSSEN GIFDASTQRN LRSKEQRFKL SNLSFWREQT YPENLGSFCL ESIDGFYSNV QAEASEITYF VERYDISRPK FLNLLSELYP EGKEIILVRD FRDVVYSMLP FSGRKCAGFD SKKFKSYQQF VYHFGKYSVG SLLARWKERS PHIYFVKYED LILSPEPTLR GILEYLSVNS SQEVINTMLK KITKNNSKPE ALLGDWQYEM PASLQVLCSE VCEAALQEFG YS
|
| |