Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1470 |
Symbol | |
ID | 4241676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 2228505 |
End bp | 2230655 |
Gene Length | 2151 bp |
Protein Length | 716 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638106623 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_721233 |
Protein GI | 113475172 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00246834 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCTTCCCC TCCTCAAAAA AATCGGAGAA ATTATTGCTA ATTGGTGGTC TGAGTTTACC CTCCAGAGCA AACTTATGGC AGTTATTACC CTGATAGTAT CTTTGCTAAT GAGTAGCTTA AGCTTCTGGG CAGTAAATAC TATTCAGGAG GATGCTCGCC TGAATGACAC TCGTTATGGT CGAGACCTGG GTTTATTATT AGCCGCTAAT GTCGCCCCAC TTATGGCAGA AGGCAATCGC AACGAAGTAG CCCGTTTTTC CAGACTTTTC TACAAAAGTA CATCTAGTGT ACGTTATATG CTCTATGCTG ATGAAGAAGG AAAGATTTTC TTAGGTATTC CCTTCTCAGA ATCTGAGGTA AAAACATCTC TTACTCTCCG TCGTCGTATT CAACTGCCAG AAGATTTTAT GGCCAATATA GAGGATGAAA AATATTCAGC TTTGCCTCTA GTGCGACAAC ATTTAACTCC TAATGGTCAA TTAACGGATG TTTTTGTTCC CCTTATTGAT GAAAGTAAAT ATTTAGGAGT TTTAGCAGTT GGAATTAATC CTAATCCTAC TGTGGTTGTC TCTTCAAATC TGACTAGAGA TGTAACTTTA GCAGTTTTTG TTTCGATCTG GGCAATGGTA ATTTTAGGTG CAGTTGTTCA TGCTTTGATT ATTACTAAAC CAATCAAGAA ATTATCGGAA GGTGTCAAAA ATATTGCTCA GGGAAATTTT AAACAAAGGA TAGACTTATC TTTTGGAAGA GAACTAGGGG AACTGATTTT GAGCTTTAAT GAAATGGCGG AACAGTTAGA AAATTATAAG AAGCAAAATA TTGAAAAATT AACGGCAGAA AAAGCAAAGT TAGAAACCTT AGTTTCCACA ATTGCTGATG GCGCTTTATT GTTAGATGCT AATTTACAAT TGATTTTAGT TAATCCAACT GCTCGGCGTA TTTTTAGTTG GGAAGAAAAA AAGGTTATTG GTGGAAAGGT GACGGATAAT TTACCTGTAG CTGTACAGAT GGAATTAAAT AGACCACTTT ATCAAATAGC TACAGGGGAA ATAGAAGGGG GTGAATATCG TTGTACTTTA GATGAACCAA ATAAACGTAC AATTAGAGTT TTATTAACAA CTGTTCTTTT ATACAGAGCA TCAGGTACAG AATCTCTTTG TAAAAGTTGT ATTTATGATG CATACGATAG TTGTAGTTCT GCTAATCGTC CTGTAGTTTA TGAATGTACA CTTTATGAAA ATAAGCTAGG AACAGATTTT ATTTCTCCAT ACCGAAATAG TCTTAAAGGA ATTGCTATGA CTGTACAAGA TATTACTAGA GAAGTAGAAT TAAATGACGC AAAAAGTCAG TTTATTAGTA ATGTCTCCCA TGAATTAAGA ACCCCTTTAT TTAATATTAA ATCTTTCATC GAAACTTTGC ATGAATATGG GGAAGATTTA AGTGAAGTAG AAAGACGAGA ATTTTTAGAG ACTGCCAATC ATGAAACAGA TCGTTTGACT CGTTTAGTTA ATGATGTATT GGATTTAAGT CGTCTAGAAT CTTGTATGAT TTATCACCTA AATGCTGTTG ATGTTGCTCA ACCAATAGAA CAAACTTTAA GAACTTATCA TCTTAATGCT AAAGATAAAA AAATAGAATT AAATTATGAT ATAGAATCTA ACTTGCCTAC TGTAGTTGGT CATTATGATT TATTACTACA AGTATTTGCT AATTTGGTAG GCAATGCTAT GAAGTTTACT GAACCAGGAG GTAGAATAGT AATTAGAGCT TATCTGTTAG AATCTGATAT AGAAATTGAA CAAATAGAAC AAGGAGGATG GATAGTTTCT CCTCCTCCAC CTCGACCAAC AGAACTAAAT TTAAAATCTA ATAATCAGTT TGTCAGAATT GAAATTTCAG ATACAGGAAG TGGTATTGAA CCTGAAGACC AAGAAGCTAT TTTTGAAAGG TTTTTCCGAG TTGAAAATCG TGTTCATACT TTGGAAGGAA CAGGTTTAGG TTTGTCTATT GTTAGAAATA TTATTGATAA GCATCATAGT AAGGTTAACC TCGTAAGTGA ACTTGGTGTA GGCACAACTT TTTGGTTTGA TTTAGCAGTA TTTGAAGAAA GGTCAGTACC AGAAGAAAAT CAGTTATTGG AAGTACCTTA A
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Protein sequence | MLPLLKKIGE IIANWWSEFT LQSKLMAVIT LIVSLLMSSL SFWAVNTIQE DARLNDTRYG RDLGLLLAAN VAPLMAEGNR NEVARFSRLF YKSTSSVRYM LYADEEGKIF LGIPFSESEV KTSLTLRRRI QLPEDFMANI EDEKYSALPL VRQHLTPNGQ LTDVFVPLID ESKYLGVLAV GINPNPTVVV SSNLTRDVTL AVFVSIWAMV ILGAVVHALI ITKPIKKLSE GVKNIAQGNF KQRIDLSFGR ELGELILSFN EMAEQLENYK KQNIEKLTAE KAKLETLVST IADGALLLDA NLQLILVNPT ARRIFSWEEK KVIGGKVTDN LPVAVQMELN RPLYQIATGE IEGGEYRCTL DEPNKRTIRV LLTTVLLYRA SGTESLCKSC IYDAYDSCSS ANRPVVYECT LYENKLGTDF ISPYRNSLKG IAMTVQDITR EVELNDAKSQ FISNVSHELR TPLFNIKSFI ETLHEYGEDL SEVERREFLE TANHETDRLT RLVNDVLDLS RLESCMIYHL NAVDVAQPIE QTLRTYHLNA KDKKIELNYD IESNLPTVVG HYDLLLQVFA NLVGNAMKFT EPGGRIVIRA YLLESDIEIE QIEQGGWIVS PPPPRPTELN LKSNNQFVRI EISDTGSGIE PEDQEAIFER FFRVENRVHT LEGTGLGLSI VRNIIDKHHS KVNLVSELGV GTTFWFDLAV FEERSVPEEN QLLEVP
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