Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1465 |
Symbol | |
ID | 4241671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 2223507 |
End bp | 2225219 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638106618 |
Product | signal transduction protein |
Protein accession | YP_721228 |
Protein GI | 113475167 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5635] Predicted NTPase (NACHT family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.137269 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAAAT ATAATTTATC TTATACTCAA CTTTTTCGAC ATACCTCTAA ACGACTGTTT TCGATTAGTT TATTTTTACT AACATTAACT ATTCTATTGT CTTGGAATTG GATATTACCT AGTTATACTC AGACACCTAA TACTAAAAAC CGTGCAGTTT TAATTCAAGA AATTAAAGAC TATGCCGAAC GTCATGTTGA GAATGATAAG GCAATGGATA GTAGGTTAAT GATTGAACTA TATGAGCAAA ATTATGTAGG TTTAACTACT CCAGAAATTA CCAAAATTTA TGAGGAAGAA TACCCAAGAC TCAAGGAAGC AAAAGATAGT AATCTCTGGG AAAAAATTAA TGACGATCTA TTTTATGGGT TGGGATGGTT TGCTGCCTTA GCACTTTTTA TTGTGTTAAT TTTTAAGGAA GCTATACAAG GTTGGATAAC TGATTTTATT AATACTATTG GCAACTGGTT ATATAATCAA ATTGCTGGTT TTGAATGGTT TTGGAATTTC TCTATAAAAC GCTATAAAAT AGGTCTCATT AATAAACACG AACAACTAAA AATTCCTTTT CGTCCTAATC GTCCTTTGAG TCTGCAAGAA ATTTATGTGG ATTTGCAATT CTTGGAAAAA GCTAATAATC AACCAATTAA TTTTTCTGAG ATTAAAAAAT ATAATTGTTT GACTATTAAG GGGCAACCTG GAGCAGGAAA AACACTTTTA TTAAAGTATC TTGTTCTCTC TTGGGCGAGG GAAAAATTAA ATAGTTCCTC TAATGAATAT GTGCCAATTT TATTAGAGTT ATATCGCTTC AATGAAATAG AAATTTCTGC CCTCAACATG GAAGTTTTCA AACATAAATT AGTAGAAGCT TTGGATAGGG ATGATTTTCC TAAAGCTAAT TCTTTTGTGG AGCAAAGTCT GGAAAAAGGA AAATTATTTT TGTTATTGGA TGGATTAGAT GAAGTTAAAA GTTCCATTCG TTATCAAATT GTACAAGCTA TTAATGATTT ATTAGATAAG TACGATAAAT GTCGAGTAAT TATTACTTGT CGGGCAGCAG TTTATTACAA TGATTTTGCT GAGTCTGTAG AAAAAACATT GGATCTTAAA GAATTTAGTG ACAGACAAAT GCGACTTTTT TTAGAAGCAT GGAAATATCA AATGCCACCA GATAAATCTA TCAATCAACT CATACAAACT TTGAGAGATA GACCTCTAAT TATGGAGTTA GCTAGAAATC CTTTAATGTT GACAATTGTT GCTCATCTTT ATACTCAAGT TAATTTTGTT TTGCCTCAGT CTCGGTCAGA TTTTTATCAA GAATCTACTC ATATTTTATT GAATCAATGG CAGAATAATT TTAATCAATA TAAGGAGAGT GCTCATAAGC GGAGAGTGCT ACAACATTTG GCTTTATTTG CTCAAGATAA TGCTGGTAAA CAACAAAAAA ATGACCTAAG TTTAGACTAT CAAATAGTCT TGGAACAAGT TCAAAAAGTT TTACCTTCTT TGAATCTCAA TCCTGAAAAA GATACTCAAC TAATATTAAG AGAAATTGTC GAACGTAGTG GATTATTGTT AAAAATTGAG AGGGGGGATA AATATCAATT TGCTCACTTA ACTTTGCAAG AATATTTTGC AGCAGCGGCT TTGAGGGAGA AAGAAAATGA GTTAATAGAA AGGTTTAAAA ATGACCCGAA ACGTTGGCGA TAA
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Protein sequence | MSKYNLSYTQ LFRHTSKRLF SISLFLLTLT ILLSWNWILP SYTQTPNTKN RAVLIQEIKD YAERHVENDK AMDSRLMIEL YEQNYVGLTT PEITKIYEEE YPRLKEAKDS NLWEKINDDL FYGLGWFAAL ALFIVLIFKE AIQGWITDFI NTIGNWLYNQ IAGFEWFWNF SIKRYKIGLI NKHEQLKIPF RPNRPLSLQE IYVDLQFLEK ANNQPINFSE IKKYNCLTIK GQPGAGKTLL LKYLVLSWAR EKLNSSSNEY VPILLELYRF NEIEISALNM EVFKHKLVEA LDRDDFPKAN SFVEQSLEKG KLFLLLDGLD EVKSSIRYQI VQAINDLLDK YDKCRVIITC RAAVYYNDFA ESVEKTLDLK EFSDRQMRLF LEAWKYQMPP DKSINQLIQT LRDRPLIMEL ARNPLMLTIV AHLYTQVNFV LPQSRSDFYQ ESTHILLNQW QNNFNQYKES AHKRRVLQHL ALFAQDNAGK QQKNDLSLDY QIVLEQVQKV LPSLNLNPEK DTQLILREIV ERSGLLLKIE RGDKYQFAHL TLQEYFAAAA LREKENELIE RFKNDPKRWR
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