Gene Tery_1465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1465 
Symbol 
ID4241671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2223507 
End bp2225219 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content31% 
IMG OID638106618 
Productsignal transduction protein 
Protein accessionYP_721228 
Protein GI113475167 
COG category[T] Signal transduction mechanisms 
COG ID[COG5635] Predicted NTPase (NACHT family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.137269 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAAT ATAATTTATC TTATACTCAA CTTTTTCGAC ATACCTCTAA ACGACTGTTT 
TCGATTAGTT TATTTTTACT AACATTAACT ATTCTATTGT CTTGGAATTG GATATTACCT
AGTTATACTC AGACACCTAA TACTAAAAAC CGTGCAGTTT TAATTCAAGA AATTAAAGAC
TATGCCGAAC GTCATGTTGA GAATGATAAG GCAATGGATA GTAGGTTAAT GATTGAACTA
TATGAGCAAA ATTATGTAGG TTTAACTACT CCAGAAATTA CCAAAATTTA TGAGGAAGAA
TACCCAAGAC TCAAGGAAGC AAAAGATAGT AATCTCTGGG AAAAAATTAA TGACGATCTA
TTTTATGGGT TGGGATGGTT TGCTGCCTTA GCACTTTTTA TTGTGTTAAT TTTTAAGGAA
GCTATACAAG GTTGGATAAC TGATTTTATT AATACTATTG GCAACTGGTT ATATAATCAA
ATTGCTGGTT TTGAATGGTT TTGGAATTTC TCTATAAAAC GCTATAAAAT AGGTCTCATT
AATAAACACG AACAACTAAA AATTCCTTTT CGTCCTAATC GTCCTTTGAG TCTGCAAGAA
ATTTATGTGG ATTTGCAATT CTTGGAAAAA GCTAATAATC AACCAATTAA TTTTTCTGAG
ATTAAAAAAT ATAATTGTTT GACTATTAAG GGGCAACCTG GAGCAGGAAA AACACTTTTA
TTAAAGTATC TTGTTCTCTC TTGGGCGAGG GAAAAATTAA ATAGTTCCTC TAATGAATAT
GTGCCAATTT TATTAGAGTT ATATCGCTTC AATGAAATAG AAATTTCTGC CCTCAACATG
GAAGTTTTCA AACATAAATT AGTAGAAGCT TTGGATAGGG ATGATTTTCC TAAAGCTAAT
TCTTTTGTGG AGCAAAGTCT GGAAAAAGGA AAATTATTTT TGTTATTGGA TGGATTAGAT
GAAGTTAAAA GTTCCATTCG TTATCAAATT GTACAAGCTA TTAATGATTT ATTAGATAAG
TACGATAAAT GTCGAGTAAT TATTACTTGT CGGGCAGCAG TTTATTACAA TGATTTTGCT
GAGTCTGTAG AAAAAACATT GGATCTTAAA GAATTTAGTG ACAGACAAAT GCGACTTTTT
TTAGAAGCAT GGAAATATCA AATGCCACCA GATAAATCTA TCAATCAACT CATACAAACT
TTGAGAGATA GACCTCTAAT TATGGAGTTA GCTAGAAATC CTTTAATGTT GACAATTGTT
GCTCATCTTT ATACTCAAGT TAATTTTGTT TTGCCTCAGT CTCGGTCAGA TTTTTATCAA
GAATCTACTC ATATTTTATT GAATCAATGG CAGAATAATT TTAATCAATA TAAGGAGAGT
GCTCATAAGC GGAGAGTGCT ACAACATTTG GCTTTATTTG CTCAAGATAA TGCTGGTAAA
CAACAAAAAA ATGACCTAAG TTTAGACTAT CAAATAGTCT TGGAACAAGT TCAAAAAGTT
TTACCTTCTT TGAATCTCAA TCCTGAAAAA GATACTCAAC TAATATTAAG AGAAATTGTC
GAACGTAGTG GATTATTGTT AAAAATTGAG AGGGGGGATA AATATCAATT TGCTCACTTA
ACTTTGCAAG AATATTTTGC AGCAGCGGCT TTGAGGGAGA AAGAAAATGA GTTAATAGAA
AGGTTTAAAA ATGACCCGAA ACGTTGGCGA TAA
 
Protein sequence
MSKYNLSYTQ LFRHTSKRLF SISLFLLTLT ILLSWNWILP SYTQTPNTKN RAVLIQEIKD 
YAERHVENDK AMDSRLMIEL YEQNYVGLTT PEITKIYEEE YPRLKEAKDS NLWEKINDDL
FYGLGWFAAL ALFIVLIFKE AIQGWITDFI NTIGNWLYNQ IAGFEWFWNF SIKRYKIGLI
NKHEQLKIPF RPNRPLSLQE IYVDLQFLEK ANNQPINFSE IKKYNCLTIK GQPGAGKTLL
LKYLVLSWAR EKLNSSSNEY VPILLELYRF NEIEISALNM EVFKHKLVEA LDRDDFPKAN
SFVEQSLEKG KLFLLLDGLD EVKSSIRYQI VQAINDLLDK YDKCRVIITC RAAVYYNDFA
ESVEKTLDLK EFSDRQMRLF LEAWKYQMPP DKSINQLIQT LRDRPLIMEL ARNPLMLTIV
AHLYTQVNFV LPQSRSDFYQ ESTHILLNQW QNNFNQYKES AHKRRVLQHL ALFAQDNAGK
QQKNDLSLDY QIVLEQVQKV LPSLNLNPEK DTQLILREIV ERSGLLLKIE RGDKYQFAHL
TLQEYFAAAA LREKENELIE RFKNDPKRWR