| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1451 |
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| Symbol | |
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| ID | 4245765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 2191817 |
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| End bp | 2193394 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638106604 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_721214 |
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| Protein GI | 113475153 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG1357] Uncharacterized low-complexity proteins
[COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.137512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAATC TTACCCTTAG TCCTTGTCAA TCTTTATCTT TCACTCAAGG CTCACTTAAG
GTTAATAAAT ATTCAATGGA TCTCTCCTAT TCAAATTTAA CAGGAGCAAA TCTCTCAGGT
GCTAATCTTG CCGGAATTAA TTTACAGGGG AGTAATCTTC AAGGTGCAAA CTTGGTAAAT
GCTAATTTAG AAGGTGCGAA TTTAAAGGAC GTCAATTTAG AAGGTGCTAA TTTAGCACGC
GCTAACTTAA AGAAAGCCAT ACTTCAAAAT AGTAATTTAG ATAATAGTAA TTTGTATGGA
TCTGACCTTC AAGCAGCTGA TTTCTCTGAA GCTAATCTCG TCAATATGAA AGCTTTATGG
GCTAATTTTC ATAATGCTAT TTTCCATCGG GCAAACTTAG AATCAGCGAA TTTTAATCGA
GCAAATTTAA GAGGGGCTGA TTTTTATAAA GCTAATCTAG AGAATGCCTC CTTGCGTTTT
ACCGATTTTG GTAGCACGAC TAACGTGATC GAAGCTAAAT TAAACCCCAC TAATTTCCGA
GAAACTCAGT TAAAAGGTGC TGATCTGTGG GGAGCAAAAA TGTGGTCAAT ATTTCAAATT
AAACAGGCTA AAAATTGGCA GGAAACCAAT AGGATGCCTA ATTGGGAACA GCAAATCAAA
CAAGCACGCT TACCCCGTTT AAGGATAGCT TTGCTCAAAC CAGAAAATGC TGACAGTATT
TCTGATACCT ATGAATTTGG GATGCGTCGT GCTGCTAACC GTCGTGTGGA AATTTGGGGT
ATTTCTTATC CCGGTGGTGT GAAGAACGAA GCGAAAATAA TTAGGCAGTT GATTAAGGAT
GGCATGGATG GGATTATCTT AACGCCTGAA GATCCTGTTC AGTCCCTTGA TGCCCTGAAA
CTGGCAAGGG ATGCTGGAGT AGCTATTACC ACTGTTGATT TCTGCTTTAA TCCTATAGAT
GCAGAAGATT TAGCTATTGC TTGCTATAAT ACAAATAGTT TTCAAATGGG CTATGATTCA
GGCCAATATA TAGCAGAATG GGCTCAAAAG AATTTACAGT CAAAATCGGT TCAAATTGGT
TTAGTTGATG GTGCTGTATA TGATCGCTAC TATCCCTATC TTCAAGGAGT CTTAAAAGCG
ATCAACCATT CGGGTATCCC TTTTCAAATT GTTGACTCTG TTAGCATTGC TTTTGGTAGT
GATATTATAA AAGTTAAAAA ACTACTTGAA GATAATCCTG ATGTTCAGAT ACTTTGGGGG
GGATCAAATA TAGCAACGGA GGTTACAGTT GCAGCAGTAG CAGAATCTGC CTTGAAGAAT
AAAGTTAAGG TTTTTGGAAT TTTAGACCTC TCAAGAAATA AAGCTACAAA ATTACTTAAT
CCCAATAGTC CTTTACAGTT GATTATTGAG CAGTCTAGTA TTCAGATTGG TTATGAGGCT
GTGAAAACAA CAATTTCTGT CTTGAGAAAA GAAATAGACG GAGCAGATTA TCAGGTTTAC
CCCGTTAAGC ACCGTCTATT AACTCAAAAT GACCCAGACA TTGTAAGTGA TATACTCAAC
GACTCAAGTT TAGAATAA
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| Protein sequence | MANLTLSPCQ SLSFTQGSLK VNKYSMDLSY SNLTGANLSG ANLAGINLQG SNLQGANLVN
ANLEGANLKD VNLEGANLAR ANLKKAILQN SNLDNSNLYG SDLQAADFSE ANLVNMKALW
ANFHNAIFHR ANLESANFNR ANLRGADFYK ANLENASLRF TDFGSTTNVI EAKLNPTNFR
ETQLKGADLW GAKMWSIFQI KQAKNWQETN RMPNWEQQIK QARLPRLRIA LLKPENADSI
SDTYEFGMRR AANRRVEIWG ISYPGGVKNE AKIIRQLIKD GMDGIILTPE DPVQSLDALK
LARDAGVAIT TVDFCFNPID AEDLAIACYN TNSFQMGYDS GQYIAEWAQK NLQSKSVQIG
LVDGAVYDRY YPYLQGVLKA INHSGIPFQI VDSVSIAFGS DIIKVKKLLE DNPDVQILWG
GSNIATEVTV AAVAESALKN KVKVFGILDL SRNKATKLLN PNSPLQLIIE QSSIQIGYEA
VKTTISVLRK EIDGADYQVY PVKHRLLTQN DPDIVSDILN DSSLE
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