Gene Tery_1403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1403 
Symbol 
ID4243074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2133698 
End bp2135026 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content32% 
IMG OID638106564 
ProductTPR repeat-containing protein 
Protein accessionYP_721175 
Protein GI113475114 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.116952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAA TTAAAAACTT ATTTATAACC AGCAGTTTTT TTTGCCTTTA CCTTTCAACT 
TCTTGTTTAG CAAAAACTAA TGAGTTTCCT GAATATACTC TAAAAAAAAT ATCTATAAAT
ATTATTTCTC AACGTCAAAT AGAAAAAGAA GAGGAGTTAG AATCTCTAGA TATATTTTCT
CCTAATCCTC TAGAAAATAC TAAACCAGAT CCACTATTAC CAAATCCTCC TACTTCTGGA
ATTATAACTG GAGAAAAACG AGAAAAACTT TCTCAGAAAC TCGAGCAACT TAATGTTGAA
GCAGCAGCAT TATTAGCAGC AGGAGACAAA ACTAAAGCTT TTGAAATTTG GAACAGAGAA
TTACGTTTGC GTCGTTATCT TGGTCAAGTA GAAGAGTTAG CAGCTTTGTC AAGAGTTGCT
GAAATAGCTT GGGATAATAG TCAAAAATTA CAGGTGCAAT GGATTACAAA AAGACTCCAA
ATTATACAAC CAGAAATTCA ACGGGAAGAA CCTCCTAATT TTGAATTATT ACAAGCATTA
GGTTCAGCAT TTAATACAGT TCGAGCTAAA GATTCAGCAG TTGAAGTTTA TCAACAGGTT
ATTAGTGAGG CAAGGAAACA AGAGGATTTT GTTACGCTAA AACAAGCTTT AATATCTGTA
GGAGAAATAT ATTTGAATTG GTTGGATTAT GATAATGCAG CGATCGCCTA TGAAGAATTA
TTAGATGTTC AGCAGCAGAG TAATTCAGAA TTCTCTAAAA TAGAAACAAC AAATCCTTCT
ATAAATGGTA ATTTTGAAAA AGCAAATACT CTGAAACAAT TAGCTTTCAT TTATAGTCAA
GGGGGGAAAC TTTTACCAGC AATTACAGCT AAAGAAAGAT TAGTAGATTT TTACGAAGGT
CAACAAAATA TTGCAGAAGT TTCAGAGATA AAAATTTCCA TTGCTGAAAA TTATGAGGAA
TTGGGAAGAC TTAATCTTGC CAGTCAATAC TATCAAGAAG CTTATAGTAT TGCTCAATCA
ATTCAACAAT TTTTAACTGC CAGTGATGCT TTAGAAAATT TAGCAGCCCT CTATCTTTCT
CAAGATGAAA AAGAGGCAGC AATTGAAATA TATAAGGTAC AATTATTAAT GGTTCAACAG
TTTGTTAATG TTTATGGTAT GATGGAAATT TATGATCGGA TGGGGCAAGT TTATGCGCAG
TTAAAGGCTT TTAGTTTCGC AATGTCATCT TTTCAAAAAG GTTTAGAATT ATCGAGACAA
TTGGGTGGAT ATCGAGAAAG TTATTTTCTA CAAAAGCTTG AAAAATTGAA TAGAAATAGA
AATAAGTGA
 
Protein sequence
MIKIKNLFIT SSFFCLYLST SCLAKTNEFP EYTLKKISIN IISQRQIEKE EELESLDIFS 
PNPLENTKPD PLLPNPPTSG IITGEKREKL SQKLEQLNVE AAALLAAGDK TKAFEIWNRE
LRLRRYLGQV EELAALSRVA EIAWDNSQKL QVQWITKRLQ IIQPEIQREE PPNFELLQAL
GSAFNTVRAK DSAVEVYQQV ISEARKQEDF VTLKQALISV GEIYLNWLDY DNAAIAYEEL
LDVQQQSNSE FSKIETTNPS INGNFEKANT LKQLAFIYSQ GGKLLPAITA KERLVDFYEG
QQNIAEVSEI KISIAENYEE LGRLNLASQY YQEAYSIAQS IQQFLTASDA LENLAALYLS
QDEKEAAIEI YKVQLLMVQQ FVNVYGMMEI YDRMGQVYAQ LKAFSFAMSS FQKGLELSRQ
LGGYRESYFL QKLEKLNRNR NK