Gene Tery_1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1340 
Symbol 
ID4242800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2040749 
End bp2041705 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content30% 
IMG OID638106517 
Productglycosyl transferase family protein 
Protein accessionYP_721128 
Protein GI113475067 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.275627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.171595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATAT TTAATATATA CCTCAGTTTT GTAATTCCTG TTTATAATGA AGAAGTTACA 
ATCAAACCCT TGTTTGAGAG AATTTTGGAT GTAATGAATT TAGGAAAAAT TGATAATTAT
GAAATCATTT TTGTGGATGA TGGTAGTAGC GATCGCTCTT GGATAGAGAT TAATAAATTA
ATCAAAAAAC ACCCCCGTCA AGTCAAAGGA ATTAGATTAA GAAGAAACTT TGGTAAATCT
TCTGCTTTAT CTGCTGGATT TAAAAAAACT AGAGGAAATA TTATCTTTAC TTTAGACGCA
GACTTACAAG ATGATCCTGC GGAAATACCT AAATTTTTGG AAAAGTTAGA GTCAGGATAT
GATTTAGTTT CTGGATGGCG AAAACATCGT AATGACCCTC TTTCTAAAAC ATTACCCTCG
AAATTATTTA ATGGAGTTAC ATCGGTTTTA ACTGGAGTCA AATTACATGA TTTTAATTGT
GGCTTAAAAG CTTATAAAAA AGAGGTATTA GATTGTATAA AGGTCTATGG AGAATTACAT
CGTTATATTC CGGTATTAGC TCATAGTTTA GGATTTAAAA TTACTGAAGT AGTTGTAGAA
CATCATAGTC GTACAAAGGG TAAATCCAAG TATGGTTTAG AACGTTATAC TCGTGGATTT
ATTGATCTAT TAACAGTTTT AGTAACTACT TATTATTTAC ATAAACCAGG TCATTTGTTT
GGTAGTTTAG GATTATTATT TGGTGTTATA GGAATGACAT CTTTGGGATA TTTAATTGTA
CTTTGGTTTA TGGAGATTCG ACCGATAGGT AATCGCCCTT TATTTTTATT TGGAATTTTG
TGTATTATTC TTTCTGTACA GTTAATATCT TTAGGAATTT TGGCAGAATT AATTACTAAA
AATGTAGATG ATAATTATGT GGATAAACAA ATTTGTGAAT TTATTGAAGA AGAGTAG
 
Protein sequence
MEIFNIYLSF VIPVYNEEVT IKPLFERILD VMNLGKIDNY EIIFVDDGSS DRSWIEINKL 
IKKHPRQVKG IRLRRNFGKS SALSAGFKKT RGNIIFTLDA DLQDDPAEIP KFLEKLESGY
DLVSGWRKHR NDPLSKTLPS KLFNGVTSVL TGVKLHDFNC GLKAYKKEVL DCIKVYGELH
RYIPVLAHSL GFKITEVVVE HHSRTKGKSK YGLERYTRGF IDLLTVLVTT YYLHKPGHLF
GSLGLLFGVI GMTSLGYLIV LWFMEIRPIG NRPLFLFGIL CIILSVQLIS LGILAELITK
NVDDNYVDKQ ICEFIEEE