Gene Tery_1308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1308 
Symbol 
ID4242459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1997564 
End bp1998322 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content34% 
IMG OID638106496 
ProductABC transporter related 
Protein accessionYP_721107 
Protein GI113475046 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATC AAACAGCTAT TTATTGTCAT AATCTCAATA AAATTTATGC TAATGGAACT 
GTTGCCTTAC AAAACATGAA CTTAACAATT AACCAAGGAG AATTTTTGAC TATTGTCGGA
CCTTCTGGAT GTGGAAAAAG TACGGTATTG CGATTAATAG CAAAATTAAG TGATGTTACT
TCAGGTAAAA TTGAGTCAAA TATAAATCAG AAGAAACATG AATTAGCTTT TGTGTTTCAA
GAACCAGCAT TAATGCCTTG GTCTCAGGTT ATTGATAATG TGTATCTACC TCTTAAATTA
GCGGGAAGAT CTCTCAGAGA AGCCCGAACA ATAGTGCAAG AAGCAATTAA TTTAGTAGGT
TTAGATGGTT TTGAGTGTTC TTATCCACGA GAGCTATCAG GTGGTATGAA AATGCGAGTT
TCTATTGCTA GAGCATTAGT AACTCAGCCA AAAATTGTGT TGATGGATGA ACCTTTTGGT
GCTTTAGATG AAATGACTCG TAATAAGTTA AATAGTGATT TATTAGGGGT ATGGAAAAAA
CGAAATTGGA CTGTAGTTTT TGTTACTCAT AATATTTATG AAGCGGTATA TTTATCTCAA
CGAGTAATTG TTATGGCTGC TCGTCCTGGC AGGGTAGTAG CAGATGTCAA AATAGATGCC
ACTTATCCTC GTAGTGAAGA CTTCCGAATG TCACAATTAT GTAATGATTA TTGTCGGAAA
ATTTCTAATT ATTTAAAAAT GGCAGTATCA AATTCTTAA
 
Protein sequence
MNNQTAIYCH NLNKIYANGT VALQNMNLTI NQGEFLTIVG PSGCGKSTVL RLIAKLSDVT 
SGKIESNINQ KKHELAFVFQ EPALMPWSQV IDNVYLPLKL AGRSLREART IVQEAINLVG
LDGFECSYPR ELSGGMKMRV SIARALVTQP KIVLMDEPFG ALDEMTRNKL NSDLLGVWKK
RNWTVVFVTH NIYEAVYLSQ RVIVMAARPG RVVADVKIDA TYPRSEDFRM SQLCNDYCRK
ISNYLKMAVS NS