| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1293 |
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| Symbol | |
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| ID | 4242043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 1973698 |
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| End bp | 1974462 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638106486 |
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| Product | ribosomal large subunit pseudouridine synthase B |
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| Protein accession | YP_721097 |
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| Protein GI | 113475036 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.159925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.17953 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATGAAA GATTACAAAA AATATTATCT CAGTGGGGCA TAGCATCTCG GCGTCAAGCT
GAACAAATGA TCATAGCGGG ACGAGTAAAG GTTAATGGTA AAATTGTCCA ATTAGGAGAA
AAGGCTCAAC CAGACTTGGA CAATATTGAA GTGGATGGTT TGCCCATTAG ACCCGAAGCT
CGACCATCAC CCATATATTT ATTGTTAAAT AAACCTATGG GAGTAATTTC AACTTGTTCG
GAACCTAGGA AACGTAGTAA AGTTTTAGAT ATCCTAAACG CAGAACTACG AAATGGAAAA
GGTATTCATC CTGTAGGACG TTTAGATGCA GACTCTACAG GAGCATTACT CCTCACAAAT
GATGGTCGGG TGACTTATTG TTTAACCCAC CCCAAATATT GTCTTTCTAA AACCTATCAA
GTTTTGGTAG AAGGTCATCC CCAAGAATCA ATCTTAAAGT TGTGGCGTCA AGGTATTATT
TTATCTGGTA AAAAAACTTT ACCCGCTGAG GTTAAAGTCT TAAAAGAATG TAATAGTTCT
CAAACTCTTT TAGAAGTGGT CATCTCTGAA GGCAGAAATC GCCAGATTCG TAGAGTTGCA
GATAAATTGG GACATCGTGT ACTTAAACTA CACCGTACTG CAATTGGTCA AATTAAGTTG
CAGTTGCCTG GAGAGTCAGT TTTACCTATT GGCCATTATA GACAATTAAA GGATTTTGAA
ATTGAGTTTT TGGATGACCA AATTATTGAA TCTAAATTCA GCTAA
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| Protein sequence | MDERLQKILS QWGIASRRQA EQMIIAGRVK VNGKIVQLGE KAQPDLDNIE VDGLPIRPEA
RPSPIYLLLN KPMGVISTCS EPRKRSKVLD ILNAELRNGK GIHPVGRLDA DSTGALLLTN
DGRVTYCLTH PKYCLSKTYQ VLVEGHPQES ILKLWRQGII LSGKKTLPAE VKVLKECNSS
QTLLEVVISE GRNRQIRRVA DKLGHRVLKL HRTAIGQIKL QLPGESVLPI GHYRQLKDFE
IEFLDDQIIE SKFS
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