| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1282 |
|---|
| Symbol | |
|---|
| ID | 4245789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 1963528 |
|---|
| End bp | 1963887 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 638106477 |
|---|
| Product | putative transposase |
|---|
| Protein accession | YP_721088 |
|---|
| Protein GI | 113475027 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3415] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.312263 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0791445 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTCTC CTTATAGCTA TGACTTAAGA CAAAAAGTTA TTAAGGCCAT TGATGGTGGG
ATGAGTAAAA CTCAAGTAAG TTCTATATTT AAGATTAGTC GTAATACCAT CAATACTTGG
TTACATAGAA GAAGAGAAAC TGGGGATATA AAAGCAAAAA CAGGTTATCA AAAAGGATAT
AATCCCAAAA TACCAGACTT AGAACAATTC AGAAAATTTG CCCAGATTAA TGGCAGTAAA
ACTCAAAAAG AAATGGCTGA TGAATGGCCA GATAAGGTAA GCGATCGCAC TATAAGTAAA
GCCTTAAAAA AAATTGGTTA TACAAGAAAA AAAAACTTAC GGTTACAGAG AAAGAGATGA
|
|---|
| Protein sequence | MPSPYSYDLR QKVIKAIDGG MSKTQVSSIF KISRNTINTW LHRRRETGDI KAKTGYQKGY
NPKIPDLEQF RKFAQINGSK TQKEMADEWP DKVSDRTISK ALKKIGYTRK KNLRLQRKR
|
|---|
| |