| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1240 |
|---|
| Symbol | |
|---|
| ID | 4242167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 1922203 |
|---|
| End bp | 1922877 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 638106452 |
|---|
| Product | heat shock protein DnaJ-like |
|---|
| Protein accession | YP_721063 |
|---|
| Protein GI | 113475002 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAGTT CTGACTATTA TAAAATCTTA AATGTTCATC CCACTGCAAC TCAGGGACAA
ATTAGACAAG CATATCGTCG TTTAGTTAAA TTATTTCACC CAGATACTAA TACAGAAGTA
GCAAACCACG AACGTATTAT TAGTATTAAT GAAGCCTATG AAGTATTAAG CGATCCTCAA
CAAAGAAAAT CTTATGATCA GCAGCTTAAT CAAAATTATC AAAGATATAG AAACATTAGC
CAAGATTACT ATAAACACAA TAAAAGAAGG CAGAATATTG ATGAACATCT GCAAAGATGG
ATAAATCATG TTTACAGACC AGTTGATACA ATTATAATTC AAATACTAAA ACCTCTAAAA
AATGAAATTG ATGATTTAGC TGCAGATCCA TTTGATGATC AATTACTTGA ATCTTTTCAA
GATTATTTAG AAACTTCTCG AGGTCTACTT AAAAAAGCTC ATAACTTATT TAGTTCTCAG
CCAAACCCAT CTAATTTTGC TGGAGTAGCA GCTCATTTAT ATTATTGTTT GAATCAAGTT
AGTGATGGAA TAGAAGATTT AGAATTATTT ACTCTAAACT ACGATGATTA TTATTTACAT
ACAGGTCAGG AATTATTTAG AATTGCTGAT AAATTGCGCC AGGAAGCACA AGCAGCAATA
AAAGGTATCT TTTAA
|
|---|
| Protein sequence | MVSSDYYKIL NVHPTATQGQ IRQAYRRLVK LFHPDTNTEV ANHERIISIN EAYEVLSDPQ
QRKSYDQQLN QNYQRYRNIS QDYYKHNKRR QNIDEHLQRW INHVYRPVDT IIIQILKPLK
NEIDDLAADP FDDQLLESFQ DYLETSRGLL KKAHNLFSSQ PNPSNFAGVA AHLYYCLNQV
SDGIEDLELF TLNYDDYYLH TGQELFRIAD KLRQEAQAAI KGIF
|
|---|
| |