| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1214 |
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| Symbol | |
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| ID | 4241787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 1886638 |
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| End bp | 1888128 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638106430 |
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| Product | RNA polymerase, sigma 28 subunit |
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| Protein accession | YP_721042 |
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| Protein GI | 113474981 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.672098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAATGA TAGGGCATAC ATTAGAACTA GACGATCTAA AAAAAATTAG TAGCCCGAAA
AAGATAGTAG CTTTGTTTGA AAAACTTGGC TTCAATTTCC AAATTGAACA TTTAGATATT
GAACAACTAG AACTACCAAG TTATTGCAGA GAAACGATTG ATAATACTTA TAAAATTTAT
AATCCGAACC AAGAGGAATT ACAAGTATTT CTTTTAGAAT TAAGACAAGA AAAATTTAAA
ACAAATTATA AAGAGCAAGA AAGAATAATA ACTATTTCTC AGGGAATCTT GAGAAACAAA
AATAATTTCT TGCTAATTGC CACAAAAAAA TATAATAAGT TAATAATAGT TGCTCCTCAT
AGAAGAGAAA ATCAAAATAT TAAAATTTCA ATTAAATGGT GGTTAATTGA TTGTCAAAAT
CCTAATTATT ATGATACTTA CTGGCTAGAA AATGTAGCTA TAAATAATTG TGAACCTACA
GAAGAATTGA CAAATAAACA TAATAGTGAA GGTAGCTACG ACCCAGACAT AGAACCGCCT
ACTGGAACAT TTACTGAAGA CTCAATTCAA CTTTATTATA AGCAAGTTAA TAGCTTCGCC
CGCTTGCACC CTGAGGAAGA AATTCATTTA GCACATCAAA TTGATGGGCT ATTAGCTTTA
GAGAAAATTT ATGAAAAATT AGAGGAAAAG CTCAACCGTT CGCCTAACGA AATAGAATGG
GCAACAGAAG CCAAAATGAG CAAATGGGAA CTGTGTGATC GCCTCGAGCA AGGTAGACGA
GCTAAAAATC AAATGGTGAC AGCTAACTTG CGACTGGTGA CATCAGTTGC CAAACGATAC
CAAAACCGTG GTCTAGACTT CCAAGATTTA ATTCAAGAGG GAGTTATAGG ATTACTTCGT
GCCACAGAAA AATTTGATCA TACAAAAGGT TATAAGTTTT CTACTTATGG TATTTGGTGG
ATTCGACAAG CTATTACCAG AGCTATTTGT GACTATTCTC GGATCGTTCG GTTGCCAGTT
TATCTCTACG AAACTATTTC CCAAATTAAG AAAATAGTTA AGCAAATTTC AATAGAATGT
TCTCCCCTAA CTGCAGAAGA AGTTGCTACA CGCATGGAAA TGACAACGGA GAAGTTGCAA
TTTATTATAG AATGCGCTCA AGAAACTTTA TCTCTAGACT ACCCTATAAA TAAAGGGGAA
AACATTATCT ACAAGGAAAT GATTAAATTT AATGGGGAAA CACCAACAAA ATATGTCTTT
GAAAATTGCT TGCAAGAAGA TGTAGAAAGT GTTTTGAAAA CTCTAACTGA ACGAGAAAGA
AATGTGTTAC AAATGCGATT CGGTTTGGAT GATGGTCAAG AAAAGACCCT CAAAGAAATT
GGTGATACTT TTAATTTAAC GCGGGAAAGA ATTAGGCAAA TAGAGGCTAA AGCATTGAGA
AAGTTAGAAG ATCCAAAGCG AAACCATATT CTCAGGGAAT ATATTCATTA G
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| Protein sequence | MIMIGHTLEL DDLKKISSPK KIVALFEKLG FNFQIEHLDI EQLELPSYCR ETIDNTYKIY
NPNQEELQVF LLELRQEKFK TNYKEQERII TISQGILRNK NNFLLIATKK YNKLIIVAPH
RRENQNIKIS IKWWLIDCQN PNYYDTYWLE NVAINNCEPT EELTNKHNSE GSYDPDIEPP
TGTFTEDSIQ LYYKQVNSFA RLHPEEEIHL AHQIDGLLAL EKIYEKLEEK LNRSPNEIEW
ATEAKMSKWE LCDRLEQGRR AKNQMVTANL RLVTSVAKRY QNRGLDFQDL IQEGVIGLLR
ATEKFDHTKG YKFSTYGIWW IRQAITRAIC DYSRIVRLPV YLYETISQIK KIVKQISIEC
SPLTAEEVAT RMEMTTEKLQ FIIECAQETL SLDYPINKGE NIIYKEMIKF NGETPTKYVF
ENCLQEDVES VLKTLTERER NVLQMRFGLD DGQEKTLKEI GDTFNLTRER IRQIEAKALR
KLEDPKRNHI LREYIH
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