Gene Tery_1201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1201 
Symbol 
ID4242544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1875929 
End bp1876612 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content34% 
IMG OID638106419 
Productglycosyl transferase family protein 
Protein accessionYP_721031 
Protein GI113474970 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGTA TTTCGATTAT TATTCCGGTG TTAAATGAAG TTGGGACGAT CGCCCAAACT 
ATTTCCACAG CTCAAACAGG AAAAAATGTA GAAATAATTG TAGTTGACGG TGGCAGTAAT
GATGGTACTA TTGAAGTTGT TAAGTCTTTA AATATTAAAC TTATTTATTC CCTCCCTGGT
CGTAGTATTC AAATGAATTT TGGGGCAAAG TTAGCAACGG GAAATATTCT TTTGTTTCTT
CATGGAGATA CTTTTTTACC ATTAAATTTT GACGAATTAT TAAGAGAAAT CATAGTTCAA
CCGAATATTA TTGCAGGTGC GTTTGAATTA GGTATTAGAG GAAAAAAAAG AATTTTACGA
ATAGTCGAGA GCATAGTAAA TTGGCGATCG CGTTATTTAC AAATGCCTTA TGGAGACCAA
GGAATTTTTC TTTCGGCTCA AGTATTTGAA CAAATTGGTT GCTTCCCAGA AATACCAATT
ATGGAAGATT TTGAGTTGAT CCAAAAGTTA AGAAAAAGAG GACGAATTGG AATTATATCA
AAACCAGTAT TAACCTCTGA TCGTCGGTGG CAAAAGTTGG GGATATTGAA AACGACTCTA
ATTAATCAAG TAATAATTAT TGCTTACTTG CTTGGGTTGC CTCCAAAAAC ATTAGCACAA
TGGTATCGTA GTCATCTGAA GTAA
 
Protein sequence
MSSISIIIPV LNEVGTIAQT ISTAQTGKNV EIIVVDGGSN DGTIEVVKSL NIKLIYSLPG 
RSIQMNFGAK LATGNILLFL HGDTFLPLNF DELLREIIVQ PNIIAGAFEL GIRGKKRILR
IVESIVNWRS RYLQMPYGDQ GIFLSAQVFE QIGCFPEIPI MEDFELIQKL RKRGRIGIIS
KPVLTSDRRW QKLGILKTTL INQVIIIAYL LGLPPKTLAQ WYRSHLK