Gene Tery_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1175 
Symbol 
ID4244059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1837408 
End bp1838166 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content39% 
IMG OID638106395 
Producturoporphyrin-III C-methyltransferase 
Protein accessionYP_721007 
Protein GI113474946 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0007] Uroporphyrinogen-III methylase 
TIGRFAM ID[TIGR01469] uroporphyrin-III C-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.4706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0224859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAGC TAAAATTTGT AGGTAAGGTG TATTTAGTAG GAGCAGGACC GGGAGATCCT 
GGATTAATTA CACTAAAAGG TAAAGTGCTA TTAAAACAAG CTGATGTTGT TATCTATGAT
GCTCTTGTCA GCGCTTCTAT CTTAGAAATG ATTAACCCAA ATGCTGAAAA ATTTAATGCA
GGTAAACGTC GAGATCGCCA TTCTCTAGAG CAAACACAAA CAACTCAACT ACTAATTGAA
AAAGCAAAAA CTCATGCAGT TGTGGTACGT CTAAAAGGAG GTGACCCTTT TGTATTTGGT
CGTGGTGGAG AGGAGATGGA AGATTTAATG CAAGTAGGAA TAGCTGTGGA AGTTATTCCG
GGGGTTACTT CCGGTATCGC TGCACCTGCT TATGCTGGTA TTCCTTTAAC TCACAGAAAC
TATAGTTCCT CGGTTACTTT TGTCACAGGT CACGAAGCAG CAGGCAAATA TCGACCAGAG
GTTAATTGGG AGGCGGTCGC CCAGGGTGCA GAAACGATAG TAATTTACAT GGGGGTTCAT
AACTTACAAA ATATTATCAA AAAACTAATC GCTGCTGGAC GTGACCCAGA AACACCAATT
GCTTTAATTC AGTGGGGAAC TTATCCAAAA CAAAAAGAAT TAATTGGAAC TCTTAATAAT
ATTGTGGGAC AAATTGAGTC AACTGGTTTT GAAGCACCAG CTATTACTGT TATTGGTAAT
GTAGTTAATT TACATCAAAT ATTAGGAAAT AGGGAGTAA
 
Protein sequence
MNQLKFVGKV YLVGAGPGDP GLITLKGKVL LKQADVVIYD ALVSASILEM INPNAEKFNA 
GKRRDRHSLE QTQTTQLLIE KAKTHAVVVR LKGGDPFVFG RGGEEMEDLM QVGIAVEVIP
GVTSGIAAPA YAGIPLTHRN YSSSVTFVTG HEAAGKYRPE VNWEAVAQGA ETIVIYMGVH
NLQNIIKKLI AAGRDPETPI ALIQWGTYPK QKELIGTLNN IVGQIESTGF EAPAITVIGN
VVNLHQILGN RE