| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1168 |
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| Symbol | |
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| ID | 4245751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 1828262 |
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| End bp | 1828981 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 638106390 |
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| Product | Thf1-like protein |
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| Protein accession | YP_721002 |
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| Protein GI | 113474941 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03060] photosystem II biogenesis protein Psp29 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.73706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000261237 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | GTGAATAATA CTCGTACTGT TTCAGATACT AAGAAAACCT TTTATCACTT TCACACCCGT
CCCATTAATT CAATATATAA TCGGGTAATT GAAGAGTTGT TAGTGGAAAT GCACCTGATT
TCCGTTAATG TTGATTATAG CTATAACCCA TTTTATGCTT TGGGTGTAGT TACAGCTTTT
GACCGTTTTA TGCAGGGATA TTCTCCACAG GAGGATAAAA CGTCGATTTT TAATGCTTTG
ATTCAAGGGC AAGAAGAGGA TCCAAACAAA TACCGTAGTG ATGCTAAAGG TTTAGAAGAT
TTAGCTGGAA AAATCTCAGC GTCTGATATA CTTTCATGGA TTTGTTTATC AAAAAATATA
GATAATACTC AATATTTGCA AGATGATTTA AGAGCTATTT CTGAGAATTC AAAATTTAGG
TATAGTCGCC TATTTGCTAT AGGTTTATTT ACTTTACTGG AAATAGTAGA TACAGAATTA
ATCAAGGAAC AAGAGAAGCG TACAGAAGCA CTTAAGAAAA TTTGCCAATC TTTAAATTTG
GTAGAAGAAA AGTTGTTAAA AGATATAGAT TTGTATCTTA GTAACTTGGA AAGAGTAGCT
CAAGCTCGTA GTGCTATGGA AGATACCCTC GCAGCCATGA GGAAAAAACG AGAAAAACGC
AGCTTAGAAA AAGTAAATCT TTCTACTTCT GGGAACAAGA CTTCAGAAGA TAGTGAGTAA
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| Protein sequence | MNNTRTVSDT KKTFYHFHTR PINSIYNRVI EELLVEMHLI SVNVDYSYNP FYALGVVTAF
DRFMQGYSPQ EDKTSIFNAL IQGQEEDPNK YRSDAKGLED LAGKISASDI LSWICLSKNI
DNTQYLQDDL RAISENSKFR YSRLFAIGLF TLLEIVDTEL IKEQEKRTEA LKKICQSLNL
VEEKLLKDID LYLSNLERVA QARSAMEDTL AAMRKKREKR SLEKVNLSTS GNKTSEDSE
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