| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1161 |
|---|
| Symbol | rpsB |
|---|
| ID | 4245744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 1820973 |
|---|
| End bp | 1821791 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638106383 |
|---|
| Product | 30S ribosomal protein S2 |
|---|
| Protein accession | YP_720995 |
|---|
| Protein GI | 113474934 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0052] Ribosomal protein S2 |
|---|
| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000246943 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGTTG TTAGTTTGGC TCAATTGCTA GAGTCAGGAG TTCACTTTGG ACATCAGACC
CGTCGTTGGA ACCCAAGGAT GTCCCAATAT ATTTTTACAG AGCGTAATGG GGTTCATATC
ATTGACCTTG TTCAAACAGC TCAATTAATG GATGAGGCTT ACAATTATAT TAGAACGGCC
TCAGAACAAG GAAAAAAATT CTTATTTGTT GGTACTAAGC GTCAAGCTGC TGGTATTATC
GCTCAAGAAG CTACTAGATG CGGAGGTTAT TATATTAACC AACGTTGGTT AGGTGGAATG
CTAACCAACT GGACTACTAT TAAGACTCGT GTAGAAAGAT TGAAAGATCT TGAGCGTCGT
GAGGAAAGTA AGGCACTAGA TTTATTGCCA AAAAAAGAAG CCTCGGTTCT TCGTCGTGAG
ATGGCTAAAC TACAAAAATA TCTGGGTGGA ATTAAAAATA TGCGTCGCCT ACCGGATGGA
GTAATTATGG TGGATCAGCG ACGAGAGTAT AATGCAGTTC AGGAATGTCA GAAGTTAAAT
ATTCCCATTG TTTCTTTATT AGATACTAAT TGTGACCCTA CTCAAGTAGA TATTCCAATT
CCAGCAAATG ATGATGCTAT TCGATCTATA AAACTTATAG TAGGTAAATT GGCTGATGCT
ATCTATGAAG GTCGTCATGG TCAACTAGAA GCAGACTATG AAGATTATTA TGAAGATTAC
GAAGAATATG AAGATGATTA TGAAGGTGCG GAAGGAGATT TAGATTTAGA TAGTGCCAAT
GAAGAGGAAT CATTGGAAGA TAATAATGAA GAAGAATAA
|
|---|
| Protein sequence | MPVVSLAQLL ESGVHFGHQT RRWNPRMSQY IFTERNGVHI IDLVQTAQLM DEAYNYIRTA
SEQGKKFLFV GTKRQAAGII AQEATRCGGY YINQRWLGGM LTNWTTIKTR VERLKDLERR
EESKALDLLP KKEASVLRRE MAKLQKYLGG IKNMRRLPDG VIMVDQRREY NAVQECQKLN
IPIVSLLDTN CDPTQVDIPI PANDDAIRSI KLIVGKLADA IYEGRHGQLE ADYEDYYEDY
EEYEDDYEGA EGDLDLDSAN EEESLEDNNE EE
|
|---|
| |