Gene Tery_1149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1149 
Symbol 
ID4244419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1807420 
End bp1807779 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content40% 
IMG OID638106372 
Productsingle-stranded DNA-binding protein 
Protein accessionYP_720984 
Protein GI113474923 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00499901 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTTTAA ATGTCGTAAC TTTGGTTGGT AGGGCAGGTA GAGACCCAGA AGTTAAATAT 
TTTGAGTCAG GTAGTGTGGT TTGTAGTTTT GCTTTAGCTG TAAATCGTCG ATCTAAAAAG
ACTGACCAAC CAGACTGGTT TGATTTAGAA ATGTGGGATA GAAATGCAGA AGTTGCTGCT
GACTATGTTC GTAAAGGTAG CTTGATAGGA GTCAAAGGCT CCTTGAAGTT TGATTATTGG
CAAGACCGTA ATACAGGGGC CAATCGTTCC AAGCCAGTAA TTAGAGTATA CCAACTAGAG
TTACTAGGTT CTAAACGTGA TAGTGAGCAG GCTGCTTTAG CAAGCTATAA TGAATTCTAG
 
Protein sequence
MSLNVVTLVG RAGRDPEVKY FESGSVVCSF ALAVNRRSKK TDQPDWFDLE MWDRNAEVAA 
DYVRKGSLIG VKGSLKFDYW QDRNTGANRS KPVIRVYQLE LLGSKRDSEQ AALASYNEF