Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1147 |
Symbol | |
ID | 4244417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 1805868 |
End bp | 1806614 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638106370 |
Product | hypothetical protein |
Protein accession | YP_720982 |
Protein GI | 113474921 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.744367 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00556147 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAATAA TGAAAGTGAT TGTTATTAGT TTTTTAGCAG TTTTACTACT GAGTGGATGT GTTCAATATG AAGTAGGAAT AAATTTTCAA AGTCAAAGTC ACGGTGAGAT TGTTCAACAT ATTAAACTAG CAAATAAGTT ACGAAATTTT AGTAGTGAGA TAGTTTCTGA CTGGTTTAAA AGTTTAGAAA CTAGAGCTTA TCAATTGCAA GGAAAAACTC AAAGAATATC TAAGGAGGAA GTTGTAGTTA CAATACCTTT TTATAATGGT ACTGAGTTGG AAGAAAAGTT CAATAGTTTT TTTCAAAATC AGGATTCAGT AGAATATCAA AATTCTTCTA CAGGGATGGC AGCAAATTTA CCCAAATTAT CATCTCACGT TAATGTGAGC CAGAATAATT TTTTTGTAGC ATTACGGAAT AAATTGAGTA TGAAATTAGA TTTGCGATTA TCTCAATCTG ATAGTAAAGT TAAAATTAAT CCAGATGAGT TCTTAGATAT GGATTTTAAG TTAATTACAC CTTGGGGTTT TAGCAATATC CAATCAAGTG AAAATAATAC AATTAACTAT CAAAATAATC GGGAAATTGT CTGGAAACTT AACCCTGGAG AAATCAATTC ATTGGATGTA GTATTTTGGA TTCCTAGCCC CATAGGAATT GGTGCAATTT TAATCAGTTT ATTTATTTGT ATAGGTATAG CTTTAAAATA TAAAATATTA CCTACTTTAG GAATAAGTAA AAATTAA
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Protein sequence | MKIMKVIVIS FLAVLLLSGC VQYEVGINFQ SQSHGEIVQH IKLANKLRNF SSEIVSDWFK SLETRAYQLQ GKTQRISKEE VVVTIPFYNG TELEEKFNSF FQNQDSVEYQ NSSTGMAANL PKLSSHVNVS QNNFFVALRN KLSMKLDLRL SQSDSKVKIN PDEFLDMDFK LITPWGFSNI QSSENNTINY QNNREIVWKL NPGEINSLDV VFWIPSPIGI GAILISLFIC IGIALKYKIL PTLGISKN
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