Gene Tery_1141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1141 
Symbolndk 
ID4244411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1798046 
End bp1798495 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content38% 
IMG OID638106364 
Productnucleoside diphosphate kinase 
Protein accessionYP_720976 
Protein GI113474915 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0105] Nucleoside diphosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.493894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00547738 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGAACGCA CCTTTATAGC GATTAAACCG GATGGTGTCC AAAGAGGACT TGTAGGCCAG 
ATTATCAGTC GCTTTGAAAC AAAAGGTTTT ACCCTAGTAG GTCTTAAAAT CATGACGGTA
ACTAAGGAAC TTGCTGAAAA ACACTATGAT GTTCACAAAG AAAGACCATT TTTTTCAAGT
TTAATAGAAT TTATTAAATC TGGTCCTTTA GTAGCAATGG TTTGGGAAGG TGAAGGAGTT
GTAGCGTCTG CGAGAAAAAT TATTGGGGCA ACTAATCCTT TGACCGCTGA ACCTGGTACA
ATTCGCGGTG ACTATGGAAT TAGTCTTGGC CGTAATCTAA TACATGGTTC TGATGCTATT
GAGACAGCTC AGACCGAAAT TAATCTTTGG TTTAAAGAAG AAGAGTTAGT ATCATGGAAA
CCTACTTTAA CTTCCTGGAT TGTAGAATAA
 
Protein sequence
MERTFIAIKP DGVQRGLVGQ IISRFETKGF TLVGLKIMTV TKELAEKHYD VHKERPFFSS 
LIEFIKSGPL VAMVWEGEGV VASARKIIGA TNPLTAEPGT IRGDYGISLG RNLIHGSDAI
ETAQTEINLW FKEEELVSWK PTLTSWIVE