Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1141 |
Symbol | ndk |
ID | 4244411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 1798046 |
End bp | 1798495 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638106364 |
Product | nucleoside diphosphate kinase |
Protein accession | YP_720976 |
Protein GI | 113474915 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0105] Nucleoside diphosphate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.493894 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00547738 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGAACGCA CCTTTATAGC GATTAAACCG GATGGTGTCC AAAGAGGACT TGTAGGCCAG ATTATCAGTC GCTTTGAAAC AAAAGGTTTT ACCCTAGTAG GTCTTAAAAT CATGACGGTA ACTAAGGAAC TTGCTGAAAA ACACTATGAT GTTCACAAAG AAAGACCATT TTTTTCAAGT TTAATAGAAT TTATTAAATC TGGTCCTTTA GTAGCAATGG TTTGGGAAGG TGAAGGAGTT GTAGCGTCTG CGAGAAAAAT TATTGGGGCA ACTAATCCTT TGACCGCTGA ACCTGGTACA ATTCGCGGTG ACTATGGAAT TAGTCTTGGC CGTAATCTAA TACATGGTTC TGATGCTATT GAGACAGCTC AGACCGAAAT TAATCTTTGG TTTAAAGAAG AAGAGTTAGT ATCATGGAAA CCTACTTTAA CTTCCTGGAT TGTAGAATAA
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Protein sequence | MERTFIAIKP DGVQRGLVGQ IISRFETKGF TLVGLKIMTV TKELAEKHYD VHKERPFFSS LIEFIKSGPL VAMVWEGEGV VASARKIIGA TNPLTAEPGT IRGDYGISLG RNLIHGSDAI ETAQTEINLW FKEEELVSWK PTLTSWIVE
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