Gene Tery_1099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1099 
Symbol 
ID4242180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1728100 
End bp1729266 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content33% 
IMG OID638106325 
Productglycosyl transferase, group 1 
Protein accessionYP_720937 
Protein GI113474876 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAT TAATCGCTAG CCATACCTAT ATTGTTGACC TTAATCGGGA AAAGTTACGA 
GCTTTAGCTA AACTTGAACC AGGTCTTGAA GTTAGGGTTG TTGTACCTCG TCGCTGGAAT
CCAAAAGGCG TACAAAGTGA AATAGTTGAA ACTAAATTTA TTGATGAGGG TTCTTTTAAA
GTAATACCTC TTTCTAATTA TAGTCAAAAT AATCAAGCTT TGCTAACTTT CGGTCCCGAA
CTAATTAGTT TGCTACGAAA ATTTAAGCCG GATATTATTC AAGTAGAACA GGGTTCTAAA
GCTTTAACTT ATGCTCAATT TATTACTTTT AATAAGCTTT TAGGACTCCA GGCTAAAAAT
TTATTTTTTA CTTGGTGGAA TTTACCTTAT GAACTCAAAT TTCCTATTTC TTACCTAGAA
AGCTATAACT TGAGAAATAC TGATGGAATT GTTGCTGGAA ATAAAGATGG AGAAAAAATT
TTAAGAAATA AGGGATACAA AGGTCTGATT AAAGTGATGC CTCAGTTAGG AGTAGATGAA
AGTTTATTTA AACCAGAACC TCAAGTAGAA TTAAGAGATA GTTTAGGAAT TAAAGATGAT
GATTTTGTAG TTGGTTTTGT GGGTCGTTTT GTTCAGGAAA AAGGATTATT AACTTTAACT
AAATCCCTAG CAGGTTTACA GGAAAAAAAT TGGAAGTGCT TGTTATTGGG TAGGGGTGAA
TTACAAGCAA CTTTGTGGGA AATAGCAACA GCATTAGGAA TTAAGGAGCG TTTGATTTTT
GTAGAAAGTG TTCCTCACAA CTATGTACAA AAATATATTA ATTTGATGAA TACTTTGGTT
TTACCGTCAG AAACTACTTA TAAGTTTAAA ACTTTAACTT CTGTGGGTTG GAAAGAACAA
TTCGGTCATG TTTTAATTGA GGCAATGGCT TGTAAGGTAC CTGTAATAGG TTCTGATTCT
GGAGAAATTC CTAATGTAAT TGGGGATGTT GGTTTGGTTT TTCCAGAGGG AAATATTGAA
GAGTTGAGGA ATTGTTTAAT GCAGTTAATG GAACAAAAAG AATTAGCCGA AAGTTTAGGA
GAAAAAGGCT ATAAAAAGGC AATGAGTCAG TATACAAATA AGTCTTTAGC TAGGCAATTA
TTAAGTTTTT ATCAGGAGTT GCTGTAG
 
Protein sequence
MKILIASHTY IVDLNREKLR ALAKLEPGLE VRVVVPRRWN PKGVQSEIVE TKFIDEGSFK 
VIPLSNYSQN NQALLTFGPE LISLLRKFKP DIIQVEQGSK ALTYAQFITF NKLLGLQAKN
LFFTWWNLPY ELKFPISYLE SYNLRNTDGI VAGNKDGEKI LRNKGYKGLI KVMPQLGVDE
SLFKPEPQVE LRDSLGIKDD DFVVGFVGRF VQEKGLLTLT KSLAGLQEKN WKCLLLGRGE
LQATLWEIAT ALGIKERLIF VESVPHNYVQ KYINLMNTLV LPSETTYKFK TLTSVGWKEQ
FGHVLIEAMA CKVPVIGSDS GEIPNVIGDV GLVFPEGNIE ELRNCLMQLM EQKELAESLG
EKGYKKAMSQ YTNKSLARQL LSFYQELL