Gene Tery_1075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1075 
Symbol 
ID4241648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1690505 
End bp1691377 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content34% 
IMG OID638106305 
ProductPhzF family phenazine biosynthesis protein 
Protein accessionYP_720917 
Protein GI113474856 
COG category[R] General function prediction only 
COG ID[COG0384] Predicted epimerase, PhzC/PhzF homolog 
TIGRFAM ID[TIGR00654] phenazine biosynthesis protein PhzF family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.939833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTT ATATTGTAGA TGTATTTGCT GAAACTAAAT ATTCTGGTAA TCAATTAGCT 
GTATTTACTG GCGCTGAAGT AGCTAATCTT TCTGATGAGA AAATGTTACA AATTGCTAGA
GAAATGAATT ATTCAGAAAC TACTTTTCTT CTCTCTTCTG AACAACAAAA TGGTGGTTAC
GATGTGCGAA TATTTACCCC GACTAAAGAA TTACCTTTTG CCGGGCATCC AACTTTAGGA
ACTGCTTATA TTATTCAGCG AAAAATTATT AAAAGTCTGG TAGAACAAGT AGTTTTAAAT
CTGGGTGTAG GGCAAATTCC TGTGAGTTGG AAAGGTGAAG TTTTATGGAT GAGCCAGAAT
GTTCCGACTT TTGCTCAAAA ACATCAAGTT GAAACTGTGG CAGAGGTATT AAATTTAGAA
GTAGTTGATA TTGATACTAG ATTTCCTATT CAGGAAGTTT CGACAGGGAT ACCTTTTATA
ATTGTACCTT TGAAAAGTCT GGTGGCATTG AAAAAAGCTA AGGTTAATTT GGATAAATAT
TATCAATTTA TTCAAACAAC AAAGGTAACA GAAATTTTGA TATTTTGCCC AGAGACATAC
AAAGATATTG ATGATTTAAG CGTGAGAATG TTTGCTCCCT ATTTAGGAAT TACTGAAGAC
CCGGCAACAG GTAGTGCTAA TGGTTGTCTA GCAGGATATT TAGCTGAGTA TAATTATTTT
AATCAGAGGA AAATTGATAT TAGAGTAGAA CAAGGATATG AAATTAATCG ACCATCTTTA
TTATTGTTAC AGGCTGAGAA AAAAGCCGGC AAAATCGAAG TATTTGTGGG TGGAAATGTT
GTGATGATTG CTCAAGGAAA ATTTGTTGCT TGA
 
Protein sequence
MDFYIVDVFA ETKYSGNQLA VFTGAEVANL SDEKMLQIAR EMNYSETTFL LSSEQQNGGY 
DVRIFTPTKE LPFAGHPTLG TAYIIQRKII KSLVEQVVLN LGVGQIPVSW KGEVLWMSQN
VPTFAQKHQV ETVAEVLNLE VVDIDTRFPI QEVSTGIPFI IVPLKSLVAL KKAKVNLDKY
YQFIQTTKVT EILIFCPETY KDIDDLSVRM FAPYLGITED PATGSANGCL AGYLAEYNYF
NQRKIDIRVE QGYEINRPSL LLLQAEKKAG KIEVFVGGNV VMIAQGKFVA