| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1068 |
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| Symbol | nirA |
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| ID | 4241953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 1672964 |
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| End bp | 1674496 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638106298 |
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| Product | ferredoxin-nitrite reductase |
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| Protein accession | YP_720910 |
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| Protein GI | 113474849 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
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| TIGRFAM ID | [TIGR02435] precorrin-3B synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGAGA CTATACAGCG CAAAATGAAA CTAAATAGTT TTGATAAATT TAAGGCAGAA
AAAGATGGTC TAGCAGTAAA AACAGAAATA GAACATTTTG CTAAAATAGG TTGGGAAGCA
ATAGACAAAA CAGACCGCAA CCACAGACTT AAATGGTTGG GTGTATTCTT TAGACCTGTA
ACTCCAGGCA AATTTATGTT ACGGATGCGT ATGCCTAATG GAATGCTCTC AAGTCAACAA
ATGCGAGTCT TGGCAGGAAT AGTCCAACGC TACGGCGATG ATGGCAATGC CGACATTACC
ACCCGACAAA ATTTACAACT GCGAGGAATT GCAATTGAAG ACATTCCAGA CATTTTCAAT
AGACTTGAAA AAGTTGGCTT AACCAGTGTT CAATCTGGCA TGGATAATGT GCGAAATATC
ACAGGTTCCC CAGTTGCTGG CATTGATGCT ACCGAACTAT ACGATACCCG TGAGTTAATC
AAGCAAGTCC AAGACATGAT TACTGACAAC AATAAAGGCA ACTTTGAGTT TACTAATTTA
CCAAGAAAAT TCAATATAGC GATCGCCGGA TGTCGTGATA ATTCAGTCCA CGCCGAAATC
AACGATATTG CATTTATTCC AGCCTACAAA AATGATAAAT TTGGCTTCAA CGTTCTGGTA
GGTGGCTTCT TTTCCGCCAA ACGGTGCGAA GCCGCTATAC CTCTAAATGC TTGGGTAGAA
CCCAATCAAG TCATTGCCCT TTGTCGAGCT ATCTTAGAAG TATATCGTGA TTACGGACTC
CGGGAAAATC GGCAAAAATC AAGGTTAATG TGGCTTATTG ACGAGTGGGG GCTCACAAAG
TTCCGCTCAC AAGTTGAGAA ACAAATAGGG CTAACTCTAG AAACAGAAGC CCTCAAAGAT
GAAATTCTCT GGGAAAAGCG TGACCACATT GGCATTTACA AACAAAAACA ACCAGGGTTA
AACTACATTG GGTTAAATAT TCCTGTTGGC AGATTATATG CTGTCGATAT GTTTGACCTA
GCTCGTTTGG CTGAAGTTTA TGGCAATGGA GAAATCCGTT TGACGGTAGA ACAAAATGTC
ATCATTCCTA ATGTTCCTGA TTCTCGGCTG GAAACATTTA GAAGTGAACC CCTCCTGAAA
AAATTTTCTT TTGAGCCTCA ACCACTAACT AGAGCTGTAG TTTCTTGTAC AGGATCACAA
TTTTGTAACT TTGCCTTGAT AGAAACTAAA AATCGCGCCT TAGCAATAGC AAAAGAACTA
GAAACGGAAC TATCAATACC AAAACCAGTA CGCATTCATT GGACTGGTTG CCCCAACTCT
TGCGGACAAC CACAGGTTGC AGACATTGGT CTGATGGGCA CTAAAGTTCG CAAAAACGGG
AAAATGGTCG ATGGTGTTAA TCTATATATG GGTGGGAAAG TTGGTAAAGA TGCTCAACTT
GGCAGTTGTG TTCAAAAAAG TATTCCTTGT GAAGACCTCA AGCCAATATT GCGGAGTTTG
CTAATTAAAA ATTTTGCTGC TCAACCAAAA TAA
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| Protein sequence | MTETIQRKMK LNSFDKFKAE KDGLAVKTEI EHFAKIGWEA IDKTDRNHRL KWLGVFFRPV
TPGKFMLRMR MPNGMLSSQQ MRVLAGIVQR YGDDGNADIT TRQNLQLRGI AIEDIPDIFN
RLEKVGLTSV QSGMDNVRNI TGSPVAGIDA TELYDTRELI KQVQDMITDN NKGNFEFTNL
PRKFNIAIAG CRDNSVHAEI NDIAFIPAYK NDKFGFNVLV GGFFSAKRCE AAIPLNAWVE
PNQVIALCRA ILEVYRDYGL RENRQKSRLM WLIDEWGLTK FRSQVEKQIG LTLETEALKD
EILWEKRDHI GIYKQKQPGL NYIGLNIPVG RLYAVDMFDL ARLAEVYGNG EIRLTVEQNV
IIPNVPDSRL ETFRSEPLLK KFSFEPQPLT RAVVSCTGSQ FCNFALIETK NRALAIAKEL
ETELSIPKPV RIHWTGCPNS CGQPQVADIG LMGTKVRKNG KMVDGVNLYM GGKVGKDAQL
GSCVQKSIPC EDLKPILRSL LIKNFAAQPK
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