Gene Tery_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1062 
Symbol 
ID4241947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1661572 
End bp1662207 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content33% 
IMG OID638106292 
Productpeptidase M22, glycoprotease 
Protein accessionYP_720904 
Protein GI113474843 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.625161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATA CGGAAAAAAA ATATGGTTTA GCAATTCATA CTACCAGTCC AGAGTTAGGT 
TTAGCTATTA GTAACTTTGA TGAATATACT CGCTCTCAAA CTTGGAACTT AGGGCGAGAT
TTATCTAATA ACCTACATCA AAAATTACAA GAGTTTATAC TACCTCAAAT ATGGCAAGAT
TTAAGCTTTA TTACTGTTGC TAAAGGTCCG GGAAGTTTCA CAGGTACTCG TATTGGTGTA
GTCACAGCTA GAACTTTAGC TCAACAATTA AATATACCAC TATTTGCCAT TTCAACTTTG
GCAACTATAG CTTGGTCATA TAAACAAAAA AGTCATAATT TATTCCTACA AATGCATGCT
CAAAGAGGGC AATTATTTAC AGCTATTTAT CAGGTAGAAG AAATGGGTAT AAATCCTATT
TCAGGAGATA CACTAATGAA TCCGCTAGTA TGGGAAAAAA TGTTAGTAGA CTGGGACAAT
TCTTATCATT TAATCCAGGT TAAAAATAGC TTGGGAAAAT ATGTTGTAAG TTTATTAGAA
TTAGCTCATT TAGAATGGCA AAAAGGAAAC AGACCACATT GGTCAGAAGC ATTACCTTTT
TATGGACAAA GTCCTGTAGA GAAATATCCT CTGTAA
 
Protein sequence
MTNTEKKYGL AIHTTSPELG LAISNFDEYT RSQTWNLGRD LSNNLHQKLQ EFILPQIWQD 
LSFITVAKGP GSFTGTRIGV VTARTLAQQL NIPLFAISTL ATIAWSYKQK SHNLFLQMHA
QRGQLFTAIY QVEEMGINPI SGDTLMNPLV WEKMLVDWDN SYHLIQVKNS LGKYVVSLLE
LAHLEWQKGN RPHWSEALPF YGQSPVEKYP L