| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1038 |
|---|
| Symbol | |
|---|
| ID | 4242001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 1625440 |
|---|
| End bp | 1627242 |
|---|
| Gene Length | 1803 bp |
|---|
| Protein Length | 600 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638106271 |
|---|
| Product | peptidase M61 |
|---|
| Protein accession | YP_720883 |
|---|
| Protein GI | 113474822 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.316472 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAG CTAAAATATT AACCATCAGT CCAACAATTA CAAGCCCAGC AATTCAATAT
AAAGTATCTA TGCCTCATCC AGAATCTCAT CTGTTTGAGG TTAGTTTGTC TGTAAGAGTT
GAAGAATTAT CTTCCTCATT ATTACAAATG TCCAAAAAAC TGGATTTAAA AATGCCAGTA
TGGACACCAG GTTCTTACTT AATCAGGGAA TATGCTAAAC ATTTGCAAGA TTTCTGTGCC
TATAGTGAAA ATAAACAACC TTTACCTTGG CAAAAACTTA GCAAAAATCA CTGGCAAATA
GAAACATTGG GAGTCTCAAA AGTAATAGTT CAGTACAAGA TATTTGCTAA TGAATTAACA
GTGCGCACCA ATCATTTAGA CTCTACACAT GCTTATTTTA ACGGTGCAGC TTTGTTCTTT
TATATTCCTG AATGTGAAAA AAATAAGATT AGGCTCGAAG TTATTTCACC ATTACCTAAT
TGGCAAATTA CGACATCTTT ACCAAAGACT CCAAATACAG AAAATACATT TGAAGCAGAA
GATTTTGATA CTTTAGTAGA TAGTCCTTTT GAGATAGGTA ACCATCAATT ATATCAATTT
GAAGTAGAAG GAAAAAAACA TCAATTAGCT ATTTGGGGAA AAGGTAATGC AGAGCCAGAA
AAATTAATTC CAGATATACA AAAAATTATT GCAGTAGAAG CAGAGTTTTT TGGTGGTTTG
CCTTATGAAG AATATTTATT TATTTTGCAT AGTTCTAGTA AAGGATTTGG TGGTTTAGAA
CATAAGTTTA GTTGTACCTT AAATTATCCG AGATTTGGTT TTAGGAATAA GGAAAAACGT
GATCGGTTCA TGCAGCTAGT TGCCCATGAA TTTTTCCACT TGTGGAATGT TAAACGTATC
CGACCTAAAG CATTAGAAGA GTTTGATTAT GACCAAGAAA ATTATACTCC TTCTCTGTGG
TTTTCTGAAG GTACAACTAG TTATTATGAC TTATTAATTC CTCTAAGAGC AGGTATTTAT
GATGTTCAAA CTTTCTTGAA AGAATTAGGA AAAGAAATTA CACTTCTGCT AACAACAATA
GGAAGAAAAG TACAACCTGT AAGTGAGTCT AGTTGGGATG CTTGGATTAA ATTATATCGT
CGGGATAATA ATAGTAACAA CTGTCAAATT TCCTATTATT TAAAGGGAGC AATGATATCT
TTATTACTTG ATTTGTTAAT TCGAGAAAAA TATGAAAATC AACGCTCACT AGATGATGTA
ATGTATCAAA TGTGGGAGAA ATTTGGTAAG TCAGAAATAG GTTTTACTCC AGAACAATTG
AAAGCTGTAA TTGAAGAGGT AGCAGAATTA GATTTGGGCA ACTTCTTTAA GAGATATATT
GATGGTTTAG ATGAGTTACC TTTTGATGAA TACTTCGGGC ATTTTGGCCT GCAACTTAAA
AAAGAAGATA ATGAATGGCC TGATTGGGGT ATGAATGTTG TTAGTGAAAA TAATAAAGAA
ATAATTAAGT TTGTAGAAAA TAACGGGCCA GCACAGTTGG CGGGAATAAA TGCAGGAGAT
CAGTTACTGG CAATAAATGG TTTTCGGGTA AATGCAGATA AGTTGGGCTA TCGCCTCAAA
GATTATCAAC CAGGAGATAT TTTGGAAGTA ACTGTTTTCC ATCAAGATGA GCTTATTACT
CATCAGATAA CTTTGGCTCA CCCCGGTCCT AGTCGTTACC AATTGGTTCC AGTGAAAAAT
CCTACGGCAA CACAAGAAAA AAATTTTGTT GGGTGGTTGG GAAGTTCATT AGAGTCTATT
TGA
|
|---|
| Protein sequence | MTEAKILTIS PTITSPAIQY KVSMPHPESH LFEVSLSVRV EELSSSLLQM SKKLDLKMPV
WTPGSYLIRE YAKHLQDFCA YSENKQPLPW QKLSKNHWQI ETLGVSKVIV QYKIFANELT
VRTNHLDSTH AYFNGAALFF YIPECEKNKI RLEVISPLPN WQITTSLPKT PNTENTFEAE
DFDTLVDSPF EIGNHQLYQF EVEGKKHQLA IWGKGNAEPE KLIPDIQKII AVEAEFFGGL
PYEEYLFILH SSSKGFGGLE HKFSCTLNYP RFGFRNKEKR DRFMQLVAHE FFHLWNVKRI
RPKALEEFDY DQENYTPSLW FSEGTTSYYD LLIPLRAGIY DVQTFLKELG KEITLLLTTI
GRKVQPVSES SWDAWIKLYR RDNNSNNCQI SYYLKGAMIS LLLDLLIREK YENQRSLDDV
MYQMWEKFGK SEIGFTPEQL KAVIEEVAEL DLGNFFKRYI DGLDELPFDE YFGHFGLQLK
KEDNEWPDWG MNVVSENNKE IIKFVENNGP AQLAGINAGD QLLAINGFRV NADKLGYRLK
DYQPGDILEV TVFHQDELIT HQITLAHPGP SRYQLVPVKN PTATQEKNFV GWLGSSLESI
|
|---|
| |