Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1035 |
Symbol | |
ID | 4241998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 1615715 |
End bp | 1616581 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638106268 |
Product | hypothetical protein |
Protein accession | YP_720880 |
Protein GI | 113474819 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.921224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.791043 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAAATTA TCGAAAGAAA ACCCAGAATA ATTTCCGCAG CTCCCTACCG AGACCGAATC ATCCATCACG CCTTATGTAA TATTATTATT CCCATCTTTG AAAAAACATT TATCTACGAT ACTTATGCCA ATAGAATCAA TTTTGGTACT CATAAAGCCC TAAGTCGCTT CACCAAATTT TCCTGTTCCA GCTGTTACGT TTTACAATGC GACATAGTTA AATATTTTCC CAGCATCGAC CATCAAATTC TCAAAGAAAT TATTCGTCGC CAAATCAAAT GTCAAGATAC TCTCTGGTTA ATTGAAAAAA TTATTGATGG AAGTAACCAA CAAATTCCGG TATTAACTAA ATTTCCCGGA GACGACTTAC TCTCTTCAAT AAATAGGAGA AAAGGTTTAC CCCTAGGAAA TTTAACTAGC CAATTTTTCG CCAACTTATA CCTCAATAAT TTCGATCATT TCATCAAAGA AGAACTGAAA GTCAAAAAAT ATCTACGTTA TGTCGATGAC TTTGCTTTAT TCTCAGACGA CAAAAAATTT CTAGTTATTG CCAGACAAAA AATTGAAACA TATCTAGCCA ACCTCTGCCT CAAGATTCAT CCTATTAAAA GCCAATTATT TCAAACAAAA AAAGGAGCTA ACTTTGTTGG TTTCCTAGTA TTGCCAAACC GCATTAGAAT ACGTTCAGAA AATTTAAGAG CTGCCAGAAA AAAAATTCGA CAATTACACG CACATTATCG ACAAGGAAAC ATAGAATCTA GCCACATCCA AAAATCTCTA CAAAGTTGGT TTGCTCATTT AGACCATGGC AATACCTGGC GCTTGAAACA AAAAATACTA ACTTTTCTCA ATACTATGGG AGAATAA
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Protein sequence | MKIIERKPRI ISAAPYRDRI IHHALCNIII PIFEKTFIYD TYANRINFGT HKALSRFTKF SCSSCYVLQC DIVKYFPSID HQILKEIIRR QIKCQDTLWL IEKIIDGSNQ QIPVLTKFPG DDLLSSINRR KGLPLGNLTS QFFANLYLNN FDHFIKEELK VKKYLRYVDD FALFSDDKKF LVIARQKIET YLANLCLKIH PIKSQLFQTK KGANFVGFLV LPNRIRIRSE NLRAARKKIR QLHAHYRQGN IESSHIQKSL QSWFAHLDHG NTWRLKQKIL TFLNTMGE
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