Gene Tery_1019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1019 
Symbol 
ID4243098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1587407 
End bp1591402 
Gene Length3996 bp 
Protein Length1331 aa 
Translation table11 
GC content35% 
IMG OID638106256 
Product5-oxoprolinase (ATP-hydrolyzing) 
Protein accessionYP_720868 
Protein GI113474807 
COG category[E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit
[COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATAA CTAAGATATT GATGACTAAT AACCGTTGGA AATTTTGGAT TGATCGTGGG 
GGTACATTCA CAGACATAGT TGCTAAATCT CCCGAGGGTA AAATTATTAT TCATAAACTA
CTATCAGAAA ATCCAGAACA CTACCCTGAT GCACCAGTTC AAGGAATTAG AGAAATATTA
AAAATTTCTC AGAATCAACC TATACCTTTA AAAGAAATAG AAGTAATTAA AATGGGTACA
ACTGTTGCTA CAAATGCTTT ATTAGAAAGA AAAGGCGATC GCACAGTTTT AGTCATTAAT
AAAGGTTTTA AAGATGCACT AAGAATTGGT TATCAAAACC GCCCTAATAT TTTTGCTCGA
CAAATTATTT TGCCAGAAAT GCTCTATGAA AAAGTCATCG AAGTTGAGTC ACGTTATACA
GCTAAAGGCG AAGAAATAAT TCCACTTCAA ACAACAGAGT TAATTTCTCA ACTTCAAACA
GCATATAATG AAGGAATTAG AAGTTGTGCT ATTGTATTGA TCCATGGTTA TCGCTACCCA
AAACACGAAC AAAAAATTCA AGAAATTGCT GAAAAAATTG GATTTACTCA AGTATCTGTT
TCCCATGAAG TTAGTCCTTT AATGAAATTA GTTAGTCGGG GAGATACTAC TGTAGTTGAT
GCTTATTTAT CACCAATTTT ACGACGATAT GTTAATCAAG TTCGTGATTT TTTACTAGAA
AAATCAGGAG GTAATAAGAA ACAGGGAAAG GATGTTTTAA ATAGTAGCAA TTCCCCAGAT
ATTAACTTAG TTAAATTAAT GTTTATGCAG TCAAATGGGG GTTTAACAGA TGCTCATAAA
TTTCAAGGCA AAGATAGTCT ATTATCTGGT CCTGCTGGTG GAATTGTTGG AGCAGTTCAA
ACAAGTAAAA ATGCAGGTTT TTATCAAATA ATTAGCTTTG ATATGGGTGG CACATCTACT
GATGTTGCTC ATTATGCTGG AGCTGCAAAT CAAATAATAG AATATGAACG AGAATTTGAA
ACAGAAATTG CTGGAATACG TCTACGAACT CCTATGATGT CGATACATAC TGTTGCTGCT
GGTGGAGGTT CAATTTTATT TTTTGATGGT GCCCGTTATC GTGTTGGACC TGAATCTGCA
GGAGCAAATC CTGGGCCGGC TGCTTATGGA AAAGGCGGAC CTTTAACAGT GACAGATTGT
AATTTAATGG TGGGAAAAAT ACAGCCAGAA TTTTTTCCTA AGGTCTTTGG TAAAGATAGA
AATTTACCCT TGAATTTAGA GATTGTTCAA GAAAAGTTTG CTCAATTAAC AGCAAAAATA
GGTGATAGTA GAAAACCGGA AGAAGTAGCA AGTGGATACT TAGCGATCGC TGTCGAAAAA
ATGGCAAATG CAATTAAAAA AATTTCTCTC CAAAAGGGTT ATGATATTTC TGAATATACA
CTTTGTTGTT TTGGCGGAGC GGGAGGACAA CATGCTTGTT TAATTGCTGA TTCTTTGGGC
ATGAAAAAAA TATTTATCCA TCCTTATGCT GGAGTTTTAT CAGCTTATGG TATGGGATTA
GCAGATATCC GAGTGATGAA AGAAAAAGCA GTTGAAAAAA CATTAACTCC TGAATTATTA
CTAGAGTTAG AGCAAATTTT TACTACGCTA GAAATGGAAA CAAAACAAGA GTTAATCACA
GGAAGTTTCT CCTCTCAAGA TTCAGATTTA GAATCTATTT TTTGTCATTC AGTATTATCT
AAAGTTCGCC TCAAATATCA AGGTAGTGAC TCAGTATTAA TAGTAGACTT TGCTAAAAAT
ATCTATACAG TAAAGGCTGA ATTTGAAACA GCTCATCGAC AAAGATATGG ATTTATAATG
ACAGAAAAAT CCTTAATAGT TGAAGCTGTT TCTCTAGAAC TTATTCAGCA TATGGAAACT
CCCGAAGAAA TAGAAAAATA TCCTAACCAA AAATCTCCTA CAACTCCAGT TACAACAACA
CAAATATACA CGGCAGAAAA ATGGCATGAT ACTCCTATTT ATTTAAGAGA AAATCTACAA
CCAGGAGACA AAATTAATAG TCCTGCTTTA ATAGTCGAAA AAACCGGAAC TAATGTTATT
GAACCGGGAT GGCAAGCAGA ATTAAATGCC AAAAATCACC TGATATTAAC CAAAAGTAAA
ACTACAGAAA AATCTATATA TTTAACCACT AAGTTTCAAA CAAAAACTTC AACTTCAGCA
GACCCAGTAA TGCTAGAAAT ATTTAATAAC TTATTTCGAG CGATCGCTGA ACAAATGGGA
ATTACATTAC AAAATACCAG CTCATCAGTA AATATTAAAG AACGCCTCGA CTTTTCCTGT
GCTATATTTG ACCAAGATGG TGAATTAGTT GCCAATGCTC CTCATATTCC CATACATTTA
GGTTCTATGA GCGAAAGTGT TAATGCCTTA ATTTATGACA AAGGTAACAC ATTCAAACCA
GGAGATGTTT ATGTTTTAAA TAATCCCTAT AATGGCGGTA CTCATCTACC AGATATAACA
GTTATTACTC CCGTGTTTTC AACTCTAGAA AAACCCAAAA ATTCTTCTGT AATTGCAAAG
GATAACTTGG AAAACAAGAG CAATAATATT TTTTTTGAAA CCAACTATAC CGAAGAAATT
GTATCCGATA CAAATATTAC TTTAAACAAT AATTATATTA CTCAAAAATC AAAGTATATA
AACTTTCCTA ATAATAAAAA ATTGATTTCG GAGAATGAGG CAAATATTTC CCTAACTTCT
CTTAAAAATA GAGAAAAAAT AAGAACCCCT ATATTTTATG TCGCCTCTCG CGGACATCAT
GCAGACATTG GTGGAATTAC CCCCGGTTCC ATGCCTCCCC ACAGCAAAAC AGTTGAAGAA
GAAGGAATAC TAATAGATAA TTTCCAACTT GTAAAAGACG GAAAATTTCA AGAAACAGAA
CTATTAAAAA TTCTCAGCTC CGGCAAATAT CCTGCTAGAA ACACTAAGCA AAATATTGCC
GACTTACAAG CACAAGTAGC TGCCAATGAA AAAGGTGTAC AAGAACTACA AAAAATGACG
GCATATTATG GCTTAGAAAC CGTACAAGCT TACATGAAAT TTGTTCAAGA TAACGCCGAA
AGCTCAGTAC GTAAAGCTAT CAAAAAATTA TCTTCATCAC TCACGAACAA AACTGCAACC
TCTATCCTAG ATGACGGCAA TAAAATTTCA GTTGCTGTTA GTATCGACAA AAAAAATCTT
AGTGCAAAAA TAGATTTTAC AGGTACATCT CCTCAACTTT CCAATAACTT CAACGCACCA
ACTGCAGTTT GTAAAGCAGC AGTATTATAT GTCTTTCGTA CTCTAGTTGA TGATGATATT
CCTCTTAATG CAGGTTGTCT GAAACCATTA GAAATTATTA TTCCTCAAGG TAGTATGTTA
GACCCAAAAT ATCCCGCAGC AGTAGTAGCA GGAAATGTAG AAACTTCTCA AGGGATCGGA
GATACTTTAT ATAATGCTTT GGGAATAATG GCATCATCTC AAGGAACTAT GAATAATTTC
ACTTTTGGTA ATAGTAAATA TCAATATTAT GAAACTATTT GTGGGGGTTC CGGTGCAGGT
ACAGACTTTG ATGGCACTGA TGCAGTGCAT ACTCACATGA CTAACTCCCG CTTAACGGAC
CCCGAAGTTT TGGAGTGGCG CTTTCCAGTA TTATTGGAAA GCTTTGCTAT TCGTTCTGGG
AGCGGGGGTA AAGGTTTATA TAAAGGTGGT AATGGAGTAG TTCGGCGGAT GCGTTTTTTG
GAACCCATGA CTGCTGGAAT ATTATCAGGT CATCGCGCTG TTTCTACCCT TGGTTTAAAT
GGTGGGGGTG ATGGCTTAGT AGGGAAAAAT TATGTGGAAC GGAGTAATGG GAAAGTTGAA
GAGTTGGGGG GAACTGCCAC TGTTGAGATG AATATAGGTG ATGTATTTGT AATTGAAACT
CCAGGTGGTG GGGGAAACAG TAGTTTCGTG AAGTAA
 
Protein sequence
MNITKILMTN NRWKFWIDRG GTFTDIVAKS PEGKIIIHKL LSENPEHYPD APVQGIREIL 
KISQNQPIPL KEIEVIKMGT TVATNALLER KGDRTVLVIN KGFKDALRIG YQNRPNIFAR
QIILPEMLYE KVIEVESRYT AKGEEIIPLQ TTELISQLQT AYNEGIRSCA IVLIHGYRYP
KHEQKIQEIA EKIGFTQVSV SHEVSPLMKL VSRGDTTVVD AYLSPILRRY VNQVRDFLLE
KSGGNKKQGK DVLNSSNSPD INLVKLMFMQ SNGGLTDAHK FQGKDSLLSG PAGGIVGAVQ
TSKNAGFYQI ISFDMGGTST DVAHYAGAAN QIIEYEREFE TEIAGIRLRT PMMSIHTVAA
GGGSILFFDG ARYRVGPESA GANPGPAAYG KGGPLTVTDC NLMVGKIQPE FFPKVFGKDR
NLPLNLEIVQ EKFAQLTAKI GDSRKPEEVA SGYLAIAVEK MANAIKKISL QKGYDISEYT
LCCFGGAGGQ HACLIADSLG MKKIFIHPYA GVLSAYGMGL ADIRVMKEKA VEKTLTPELL
LELEQIFTTL EMETKQELIT GSFSSQDSDL ESIFCHSVLS KVRLKYQGSD SVLIVDFAKN
IYTVKAEFET AHRQRYGFIM TEKSLIVEAV SLELIQHMET PEEIEKYPNQ KSPTTPVTTT
QIYTAEKWHD TPIYLRENLQ PGDKINSPAL IVEKTGTNVI EPGWQAELNA KNHLILTKSK
TTEKSIYLTT KFQTKTSTSA DPVMLEIFNN LFRAIAEQMG ITLQNTSSSV NIKERLDFSC
AIFDQDGELV ANAPHIPIHL GSMSESVNAL IYDKGNTFKP GDVYVLNNPY NGGTHLPDIT
VITPVFSTLE KPKNSSVIAK DNLENKSNNI FFETNYTEEI VSDTNITLNN NYITQKSKYI
NFPNNKKLIS ENEANISLTS LKNREKIRTP IFYVASRGHH ADIGGITPGS MPPHSKTVEE
EGILIDNFQL VKDGKFQETE LLKILSSGKY PARNTKQNIA DLQAQVAANE KGVQELQKMT
AYYGLETVQA YMKFVQDNAE SSVRKAIKKL SSSLTNKTAT SILDDGNKIS VAVSIDKKNL
SAKIDFTGTS PQLSNNFNAP TAVCKAAVLY VFRTLVDDDI PLNAGCLKPL EIIIPQGSML
DPKYPAAVVA GNVETSQGIG DTLYNALGIM ASSQGTMNNF TFGNSKYQYY ETICGGSGAG
TDFDGTDAVH THMTNSRLTD PEVLEWRFPV LLESFAIRSG SGGKGLYKGG NGVVRRMRFL
EPMTAGILSG HRAVSTLGLN GGGDGLVGKN YVERSNGKVE ELGGTATVEM NIGDVFVIET
PGGGGNSSFV K