Gene Tery_1006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1006 
Symbol 
ID4245533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1571054 
End bp1571557 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content34% 
IMG OID638106245 
Productputative transposase 
Protein accessionYP_720857 
Protein GI113474796 
COG category[L] Replication, recombination and repair 
COG ID[COG3415] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.959997 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGGAG TAGTAAAAAT TGAGATAAAT GAATCGGTAG AAACTCTCAA AAAACTTTTA 
AAAAGTGCGA GTACAGCTCA AGAAAAGGAA AGACTTCAAA CTATTTACTG GTTGAAAACT
CAAACAGTAG AAACAGTAAA AGAAATTGCG ATAATGTTAG GACGCAATCG AGTCACAGTA
CAAAAATGGT TAGGGAAATA TCGTACAGGT GGACTGAATC TTTTACTAGA ACCAAAGAAA
AATCTAGGAG GGAGGCCAAG TTCAATTCCA CCAAATGTAA TCGAGAAATT AGAAGCAGAA
TTGCAAAACC CGGAAGGTTT CCAAAGCTAT GGTGAAATTC AACAGTGGTT AACGACTTGT
TTTGACATCA AGCTGTCTTA TCGAACAGTT CATCAATTAG TCAGATATAA ATTAAAAAGT
AAATTAAAAG TTCCACGTCC AAATCACATA AAACAAAATA AAGAAGCTCA AGAAAACTTT
AAAAAAAACT CTCATCTCAA CTAG
 
Protein sequence
MSGVVKIEIN ESVETLKKLL KSASTAQEKE RLQTIYWLKT QTVETVKEIA IMLGRNRVTV 
QKWLGKYRTG GLNLLLEPKK NLGGRPSSIP PNVIEKLEAE LQNPEGFQSY GEIQQWLTTC
FDIKLSYRTV HQLVRYKLKS KLKVPRPNHI KQNKEAQENF KKNSHLN