Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1003 |
Symbol | |
ID | 4245530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 1567748 |
End bp | 1568413 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638106242 |
Product | NmrA-like |
Protein accession | YP_720854 |
Protein GI | 113474793 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.95557 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCAT TTATTCCTGG AGCAACTGGT CAAACAGGCC GTCGAATCGT ACAAGAGTTG GTAAGACGAG ATATTCCTGT TAAAGCTTTA GTTCGTAACT TAGAAATGGC TAGAGAAATT CTGCCTCCAA AAGCAGAGCT AGTTATGGGG GATGTCCTTA ATCCTACTAG TCTTTATAAT GCTATGGGGG ATAGCACAGT TGTATTATGT GCTACAGGTG CTAAACCTAA CTTTAATTTT GCTGGTCCAT TAATGGTTGA TTATTTAGGA ACTAAAAATT TAGTAGATGT TTCAAAGCAG AAGGGTATTA AACATTTTGT TTTAGTTTCA TCCCTCTGTG TGTCTAAGTT TTTTCACCCC TTAAATTTGT TCTGGTTAGT TTTATTTTGG AAGAAACAAG CTGAAGAATA TATTAAGAAA AGTGGTATTA ATTATACTAT TGTCCGCCCT GGTGGTTTGA AAAATGATGA CAATCAATTT CCTATTGTGA TGGAACCTGC AGATCGCTTA TTTGAAGGTA GTATTCCTCG TACTAAAGTC GCACAAGTTT CTGTAGAGGC TATTTTTCAA TCAGCAGCTT GTAATAAAAT TGTAGAGATT GTTACTCAGG CAAAAGCGCC TGAAAAATCT TTGGTAGAAT TATTTAGTTC TCCCTCTTTG CAGTAG
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Protein sequence | MKAFIPGATG QTGRRIVQEL VRRDIPVKAL VRNLEMAREI LPPKAELVMG DVLNPTSLYN AMGDSTVVLC ATGAKPNFNF AGPLMVDYLG TKNLVDVSKQ KGIKHFVLVS SLCVSKFFHP LNLFWLVLFW KKQAEEYIKK SGINYTIVRP GGLKNDDNQF PIVMEPADRL FEGSIPRTKV AQVSVEAIFQ SAACNKIVEI VTQAKAPEKS LVELFSSPSL Q
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