| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0998 |
|---|
| Symbol | |
|---|
| ID | 4245525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 1562383 |
|---|
| End bp | 1562916 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638106237 |
|---|
| Product | phycobilisome protein |
|---|
| Protein accession | YP_720849 |
|---|
| Protein GI | 113474788 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.401472 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGATG CTTTTTCAAA AGCTGTAGTT ACAGCAGATA CAAAAACTGC TCCTATTGGT
ACCGAAGAAT TAGCTAGCCT GAAAGAATTC ATTGCCGCAG GTAACAAGCG TCTTGATTCA
GTAAACGCTA TTACTAGCAA CGCCAGCTGT ATTGTATCTG ATGCTGTTGC TGGTATGATC
TGTGAAAACA ATGGATTAAT CCAGGCAGGT GGTAACTGCT ATCCTAACCG TCGTATGGCT
GCTTGCTTGC GTGATGGAGA AATTATTCTC CGCTATGTTA CCTATGCACT ACTAGCTGGG
GATGCTTCTG TCCTCAATGA CCGTTGCTTA AATGGTTTGA AAGAAACCTA CATCGCATTA
GGTGTACCAG CTACAAGTGC AGCTCGTGCA GTGGGAATTA TGAAAGCAGC AGCTGTTGCT
TTTATCAACA ATACAGCTTC TCAACGCAAG ATGAGTGTTA CTGAAGGTGA CTGCTCTAGT
TTAGCCAGTG AATGTGCAGG CTACTTTGAT ACAGTCATTG CTGCTATTAG TTAA
|
|---|
| Protein sequence | MLDAFSKAVV TADTKTAPIG TEELASLKEF IAAGNKRLDS VNAITSNASC IVSDAVAGMI
CENNGLIQAG GNCYPNRRMA ACLRDGEIIL RYVTYALLAG DASVLNDRCL NGLKETYIAL
GVPATSAARA VGIMKAAAVA FINNTASQRK MSVTEGDCSS LASECAGYFD TVIAAIS
|
|---|
| |