| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0990 |
|---|
| Symbol | |
|---|
| ID | 4245439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 1555350 |
|---|
| End bp | 1556627 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638106231 |
|---|
| Product | HEAT repeat-containing PBS lyase |
|---|
| Protein accession | YP_720843 |
|---|
| Protein GI | 113474782 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1413] FOG: HEAT repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.260401 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAGC GTTTTTTCAA TATATTTCCT GGATTAACTG AAGAAAAAGC AATTGCTTTG
TTAGAAACAC CTCTAGAAGA ATTAGAAGAT AAATCAGACC GTTATATTGC AGCTAGTCAT
TTAGTTAATT TTCCTAGCGA ACGATCAATT AATGCTTTAA TTAAAACTAT ACAAGATACA
AATCCTGTTT TAGAACAAAA AATTGCTAGA CGTAAGGCGA TCGAAACATT GGGGCGTTTA
AATGTGGTAT CAGCATTGCC CACAATTCGA TCTTGTTTGG GTGATGCGGA CTGCTACACT
ACAGAAAATG CTGTTTGGGC AATTGGCGAA ATAGGCACTG AAGACCAAGA AATTCTGGCA
GAAATTGCTC AGTTGTTGGA AAAACCTGAT CAAAGTTATC GTTTGATTAT TCAGGTGTTA
GGAAAGTTTA ACTATAAACC TGCAATAACT AAGATTCAGC AGTTTACAGA ATATGATGAC
AAACCTATTG CTAGTGCAGC GATCGCTACT ATTTGCCGTT TAACGGGGGA CTACTCACAA
ATAACAAAGG TGGTGGAGTT TTTACAGCAC TCTAGTGTTA ATGCTAGGCG GGGTTGTATT
CAAGATCTGA TTGATACTAA ATATTATAAG TCGATTCCAA ATATTGCAAA ATGCCCTGTA
TCCATGGTTT TTCGTCTCCG GGGCATTAGA CTTTTAGCAC AAGCAGGTAT TCCCACAGGT
GAGATTAACT TTGCTGAAAT TGAACCCTTT TTAGATTCAG TTATTCGCGA CCATCCCAAT
GATTTAGAAT TAGTTCACGA ATATGACCAA GCTCCAGCCT TAGAATTTGT GATTAAGGAA
TTATATAGTA CAGATTTTGG TAGGTGTTAT TTAGCTAGTA AGACTCTTTT GCAACATTTT
GATCCAGAAG TTACAGGTGC AACATTAATG GCAACTTTTG CAGAAAGTGC CCATAATGAT
TATGGTGCTC ACTATCATGT AGTTAAACTT TTAGGTTGGC TTAAATATGT TGATGCTTAT
GATTTGTTGG TAGAAGCACT TTACAATAAA GCACCTCAGT TTCAAAAATC TCGTGGTGCT
GCTGCACTTG CTCTGGCAAA TTTGGGAGAT GAGCGATCGA TACCTTTGCT TAGAAAAACT
ATCAGTGATA CAAGAATTTT TGATTTGAAA TATGCTTGTT TATTGGCATT AAGACAGTTA
GGAGATAGTC AGACTGCTAA GGTGCTTGTT GATGATTCAG ATTTATTGAT TCAAACTAAA
GCCAAAAGTA TGATTTGA
|
|---|
| Protein sequence | MDKRFFNIFP GLTEEKAIAL LETPLEELED KSDRYIAASH LVNFPSERSI NALIKTIQDT
NPVLEQKIAR RKAIETLGRL NVVSALPTIR SCLGDADCYT TENAVWAIGE IGTEDQEILA
EIAQLLEKPD QSYRLIIQVL GKFNYKPAIT KIQQFTEYDD KPIASAAIAT ICRLTGDYSQ
ITKVVEFLQH SSVNARRGCI QDLIDTKYYK SIPNIAKCPV SMVFRLRGIR LLAQAGIPTG
EINFAEIEPF LDSVIRDHPN DLELVHEYDQ APALEFVIKE LYSTDFGRCY LASKTLLQHF
DPEVTGATLM ATFAESAHND YGAHYHVVKL LGWLKYVDAY DLLVEALYNK APQFQKSRGA
AALALANLGD ERSIPLLRKT ISDTRIFDLK YACLLALRQL GDSQTAKVLV DDSDLLIQTK
AKSMI
|
|---|
| |