Gene Tery_0987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0987 
Symbol 
ID4245436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1552440 
End bp1553297 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content37% 
IMG OID638106228 
ProductHEAT repeat-containing PBS lyase 
Protein accessionYP_720840 
Protein GI113474779 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.322977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0540864 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAATA TTTCTGAGAA ATTACCAGAC CCCATAGAAA CTGAACAATT ATTAAAACAA 
ATTAATGAAC AACTTACCCA AAAAACATTT GACCCAAAAG ACTCTGAGCT ATTACAAAAA
ATGGTAGAAG CCCTCGCAGA TAAACGAGGT ATGATTCGAT TAGGTTTTGT TGAGGCTTTT
GGTAAAATTG GCAAACCCAT AACTCCTTTC TTGTTAAAAG CACTAGCAAA TCATCCTAAT
CCTGTTGTGA GGCGCTCGGC CGGAAAAGGA TTAGCTCAAA TTCAAGAACC ATCCTCTATT
CCCACTTTAA TTAATGCACT ATTAAATGAT GAGGATACAG TGGTCAAAAG TTCATCTGCC
GGAGCATTAG CCAAAATGGG TGCCCTCGCC GTTAAACCTT TGTTAGAAAT CATAAAAGGA
GATTATCCTG GTACATGTAA GGGGCAAGCT AGTTGGGCAT TAGGCTTTAT TGGTTCAGAA
GGTATTGAAG AATTATTGTT AGCATACCAA TCAGATCACA GAGATGTTCG AGTTAGTGTA
GTAGGAGCAT TAGGGAGAAT AGCAGAAAGC AGATGGGATA ATAGTTTAGA GCAAATTCTC
TTTTCTGCCC TTGAGGATCG AGATATTGAA GTGCGTCTGG AAGCGATCGC GACTTTAAGT
AAAATACCAC CAGCATTGGC ATTAGCTAAA CTTATTCCTC TATTAGAGGA ATCTAATTTA
GAATTATCAA AAGCAGCTTT TCTAGCATTA GGAAAATTAG GAGAAAAAGA AGCTTTACCT
TATTTAGAAG CTAAATTAGA AGATAATCGA CCTGGAATTT CACAAGTTGC TAAAATTGCT
ATTTCTCAAA TTAAATAA
 
Protein sequence
MVNISEKLPD PIETEQLLKQ INEQLTQKTF DPKDSELLQK MVEALADKRG MIRLGFVEAF 
GKIGKPITPF LLKALANHPN PVVRRSAGKG LAQIQEPSSI PTLINALLND EDTVVKSSSA
GALAKMGALA VKPLLEIIKG DYPGTCKGQA SWALGFIGSE GIEELLLAYQ SDHRDVRVSV
VGALGRIAES RWDNSLEQIL FSALEDRDIE VRLEAIATLS KIPPALALAK LIPLLEESNL
ELSKAAFLAL GKLGEKEALP YLEAKLEDNR PGISQVAKIA ISQIK