Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0987 |
Symbol | |
ID | 4245436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 1552440 |
End bp | 1553297 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638106228 |
Product | HEAT repeat-containing PBS lyase |
Protein accession | YP_720840 |
Protein GI | 113474779 |
COG category | [C] Energy production and conversion |
COG ID | [COG1413] FOG: HEAT repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.322977 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0540864 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTAATA TTTCTGAGAA ATTACCAGAC CCCATAGAAA CTGAACAATT ATTAAAACAA ATTAATGAAC AACTTACCCA AAAAACATTT GACCCAAAAG ACTCTGAGCT ATTACAAAAA ATGGTAGAAG CCCTCGCAGA TAAACGAGGT ATGATTCGAT TAGGTTTTGT TGAGGCTTTT GGTAAAATTG GCAAACCCAT AACTCCTTTC TTGTTAAAAG CACTAGCAAA TCATCCTAAT CCTGTTGTGA GGCGCTCGGC CGGAAAAGGA TTAGCTCAAA TTCAAGAACC ATCCTCTATT CCCACTTTAA TTAATGCACT ATTAAATGAT GAGGATACAG TGGTCAAAAG TTCATCTGCC GGAGCATTAG CCAAAATGGG TGCCCTCGCC GTTAAACCTT TGTTAGAAAT CATAAAAGGA GATTATCCTG GTACATGTAA GGGGCAAGCT AGTTGGGCAT TAGGCTTTAT TGGTTCAGAA GGTATTGAAG AATTATTGTT AGCATACCAA TCAGATCACA GAGATGTTCG AGTTAGTGTA GTAGGAGCAT TAGGGAGAAT AGCAGAAAGC AGATGGGATA ATAGTTTAGA GCAAATTCTC TTTTCTGCCC TTGAGGATCG AGATATTGAA GTGCGTCTGG AAGCGATCGC GACTTTAAGT AAAATACCAC CAGCATTGGC ATTAGCTAAA CTTATTCCTC TATTAGAGGA ATCTAATTTA GAATTATCAA AAGCAGCTTT TCTAGCATTA GGAAAATTAG GAGAAAAAGA AGCTTTACCT TATTTAGAAG CTAAATTAGA AGATAATCGA CCTGGAATTT CACAAGTTGC TAAAATTGCT ATTTCTCAAA TTAAATAA
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Protein sequence | MVNISEKLPD PIETEQLLKQ INEQLTQKTF DPKDSELLQK MVEALADKRG MIRLGFVEAF GKIGKPITPF LLKALANHPN PVVRRSAGKG LAQIQEPSSI PTLINALLND EDTVVKSSSA GALAKMGALA VKPLLEIIKG DYPGTCKGQA SWALGFIGSE GIEELLLAYQ SDHRDVRVSV VGALGRIAES RWDNSLEQIL FSALEDRDIE VRLEAIATLS KIPPALALAK LIPLLEESNL ELSKAAFLAL GKLGEKEALP YLEAKLEDNR PGISQVAKIA ISQIK
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