Gene Tery_0969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0969 
Symbol 
ID4243224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1525249 
End bp1525980 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content39% 
IMG OID638106213 
ProductGTP cyclohydrolase 
Protein accessionYP_720825 
Protein GI113474764 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0257975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.517316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAT CTTCTTCCAA CCGTTCCAAT TCTAAGAACA CACTCAACAT GAATGGAGTT 
AAAACTTCTG ATGCAAATAT GACGAGTCAA ATTTCCTATA GACCTGAGCG TATCTCCTCA
TCCAATGGTC AATCAATTAA GCAAAAGCTT TCTACTGAAG ACAGCAATGA GAGAATGAAG
GAGGCAGTGC GGACAATCTT ACTCTCAGTA GAAGAAAATC CTGAACGAGA AGGATTACTC
AATACTCCCA AGCGGTTTGC AGAAGCAATG CAGTTTCTGA CTAGTGGCTA CAGTCAATCC
CTCGAAGAAA TTGTGAATGG TGCGATTTTT GACGAAGGTC ATAATGAAAT GGTTCTAGTT
AGAGATATCA ATTTTTTTAG TCTTTGTGAA CATCATATGT TACCCTTCAT GGGAAAAGCT
CATATCGCTT ACATTCCTAA TCAAAAAGTA GTAGGACTCA GTAAGCTAGC TAGAGTTGTC
GACATGTACT CTCGTAGATT GCAAGTCCAG GAGCGACTAA ATCGTCAAAT TGCTGAGGCA
ATTCAAACAA TTTTGGAACC AAAGGGCGTA GCAGTTGTAA TTGAGGCTAC TCATATATCT
ATGGTAATGC GAGGGGTTCA AAAACCTGGT TCTTGGACTG TTACTAGTGC CATGGTTGGT
CTTTTTAAAG AAGATCAGAA AACAAGAGAA GAATATCTAA ACTTAATTCG CCATCAACCT
ACCTTCTTTT AA
 
Protein sequence
MTQSSSNRSN SKNTLNMNGV KTSDANMTSQ ISYRPERISS SNGQSIKQKL STEDSNERMK 
EAVRTILLSV EENPEREGLL NTPKRFAEAM QFLTSGYSQS LEEIVNGAIF DEGHNEMVLV
RDINFFSLCE HHMLPFMGKA HIAYIPNQKV VGLSKLARVV DMYSRRLQVQ ERLNRQIAEA
IQTILEPKGV AVVIEATHIS MVMRGVQKPG SWTVTSAMVG LFKEDQKTRE EYLNLIRHQP
TFF