Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0958 |
Symbol | |
ID | 4243213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 1511514 |
End bp | 1513337 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638106208 |
Product | poly-gamma-glutamate biosynthesis protein |
Protein accession | YP_720820 |
Protein GI | 113474759 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2843] Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0278824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0914422 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGTCAGG AAGAAATATT AATACGAGGA AAACAAGGAG ACCCTAAAGC GATCGCATTT CTCATCAACC AAATATTAAA TAATATAGGA ATTCAAGCTA GAGCTAATAT TCAGAAAAAG AATCTGCATC TTTTGCTAGA AGCATCTGAA GTGCCAAATC GCGAAATTTC TATTAGAGTA ATTTATCAAG TGATGAAAGT CCTCAAATCA CCATTGATTG ATTTTGTCAA TATTTATGGA CGAATCAATG GTCATACAAT TCCTGAGTGG ACAGAAGTAA TTGAATTACA TCAAGCTAAA ATATACCATC CGGCAGGATT AGAAACAATT TTGTGGCAAT TAGAAAACAC AAATTATGCT CAAGAATATT CTATACTAAC TCTGCCTTAC CTACCTAAAA AAGCAACTTT ACATAATTCA GAAATAACAA AAAAAAAGCA AAAAGAAGAA GTTGATTATT CTGTTATTAA TATCAATCAA ACTGTTATAA ACAGATGTCA TGTAGTAAAA AAAGAAAAAA AATTTTTTTC CCAAATGGAG AGGCAATATT CAAAGAATAA AAATAAATTT ATTTGGATAT TAGCAAGTGC GATTAGTATA TTATTGCTGC CTATATCCAC TGTAGTTATT AATTCTCAAA CTGACAGAAT AAATCCTATT ATTTCAAAGA TTTTTTTGCT ACCTAAAATC TCTCATCTCA ATACTTCAGA AGTAGAAGTT AGTAATTCAG TTCCAGCAAG TATATCTACT CGCAATACTA GACAAAGTAT TGAAACTAAA CCAACTAAAA GTCAACTTAA TTTATCAGAA GTTTTTGAGT TTATTTTATC ATCAATTAAA TCTCCTATAA ACCCTGATAC TAGAATCACT ATTAAGGCAG TGGGTGATAT TATTCCAGGT ACTAATTATC CTCAAAATAA ATTACATCCA AGGAAACAAG AATTACTGGC ATCAGTGAAA CCACTTTTGC AAAATGCTGA TCTTGTATTT GGTAATTTTG AAAGTACCTT AACAAATTAT CCTAAGAGTC GGAAAAGAAT GGGTAATGGT CGGGTATTTG CTTTTAGAAC ACCGCCAGAT TATAGAAATT TATTGAAAGA TGCTGGTTTT AATATATTAA GTGTGGCAAA TAATCATTCT TTCGATTTCT TTAAGCAAGG TTTTGAGGAT ACAATTGCAA ATATTAAGAC TGTAGGAATG CAGGCAGTTG GTAAAAAAGG AGAAATTGTT TATCGGAAAG TTAAAGGAAT TAATATAGGG TTTATTGCGT TTAGTAATTA TAGTTATCAT AACTCTATGC TTGACCTATA TTCTGCTAAG AAACTTGTGC AAGAAGCAGA TAAAAATGCA GATATTGTTG TTATATCTGT TCATGCAGGT GCAGAAGGAA CTAGAGCATT AAGAATCAAG AATAAAACAG AGTATTTTTT TGGTGAAAAT AGAGGCAATA AAGTTTTATT TGCCCATAAA TTAATAGATG AAGGTGCAGA TTTAATTTTG GGTCATGGTC CTCATGTACC AAGAGCAATG GAAATTTATC AAGGAAAATT AATTGCTTAT TCTCTAGGAA ATTTTATGGG TTATCGTACT TTATCTAGTA AGGGAAAGTT GGGATATTCT TTGGTTTTAG AGTTAGATAT TAATATTAGA GGAGATTTTA TTTCTGGAAA AATTTTGCCT GTACATTTGA ATAGTAAGGG TATTCCTTAT CCCGATAAAC TTGGTCGAAG TATTAAGTTA ATTAAGGAAT TAACACAAAA AGATTTTCCG AAGACAATGT TAGAAATTAA TAGTAAGGGT GAGATAACAA GGAAGAAAGG ATAA
|
Protein sequence | MSQEEILIRG KQGDPKAIAF LINQILNNIG IQARANIQKK NLHLLLEASE VPNREISIRV IYQVMKVLKS PLIDFVNIYG RINGHTIPEW TEVIELHQAK IYHPAGLETI LWQLENTNYA QEYSILTLPY LPKKATLHNS EITKKKQKEE VDYSVININQ TVINRCHVVK KEKKFFSQME RQYSKNKNKF IWILASAISI LLLPISTVVI NSQTDRINPI ISKIFLLPKI SHLNTSEVEV SNSVPASIST RNTRQSIETK PTKSQLNLSE VFEFILSSIK SPINPDTRIT IKAVGDIIPG TNYPQNKLHP RKQELLASVK PLLQNADLVF GNFESTLTNY PKSRKRMGNG RVFAFRTPPD YRNLLKDAGF NILSVANNHS FDFFKQGFED TIANIKTVGM QAVGKKGEIV YRKVKGINIG FIAFSNYSYH NSMLDLYSAK KLVQEADKNA DIVVISVHAG AEGTRALRIK NKTEYFFGEN RGNKVLFAHK LIDEGADLIL GHGPHVPRAM EIYQGKLIAY SLGNFMGYRT LSSKGKLGYS LVLELDINIR GDFISGKILP VHLNSKGIPY PDKLGRSIKL IKELTQKDFP KTMLEINSKG EITRKKG
|
| |