Gene Tery_0958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0958 
Symbol 
ID4243213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1511514 
End bp1513337 
Gene Length1824 bp 
Protein Length607 aa 
Translation table11 
GC content30% 
IMG OID638106208 
Productpoly-gamma-glutamate biosynthesis protein 
Protein accessionYP_720820 
Protein GI113474759 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2843] Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0278824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0914422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCAGG AAGAAATATT AATACGAGGA AAACAAGGAG ACCCTAAAGC GATCGCATTT 
CTCATCAACC AAATATTAAA TAATATAGGA ATTCAAGCTA GAGCTAATAT TCAGAAAAAG
AATCTGCATC TTTTGCTAGA AGCATCTGAA GTGCCAAATC GCGAAATTTC TATTAGAGTA
ATTTATCAAG TGATGAAAGT CCTCAAATCA CCATTGATTG ATTTTGTCAA TATTTATGGA
CGAATCAATG GTCATACAAT TCCTGAGTGG ACAGAAGTAA TTGAATTACA TCAAGCTAAA
ATATACCATC CGGCAGGATT AGAAACAATT TTGTGGCAAT TAGAAAACAC AAATTATGCT
CAAGAATATT CTATACTAAC TCTGCCTTAC CTACCTAAAA AAGCAACTTT ACATAATTCA
GAAATAACAA AAAAAAAGCA AAAAGAAGAA GTTGATTATT CTGTTATTAA TATCAATCAA
ACTGTTATAA ACAGATGTCA TGTAGTAAAA AAAGAAAAAA AATTTTTTTC CCAAATGGAG
AGGCAATATT CAAAGAATAA AAATAAATTT ATTTGGATAT TAGCAAGTGC GATTAGTATA
TTATTGCTGC CTATATCCAC TGTAGTTATT AATTCTCAAA CTGACAGAAT AAATCCTATT
ATTTCAAAGA TTTTTTTGCT ACCTAAAATC TCTCATCTCA ATACTTCAGA AGTAGAAGTT
AGTAATTCAG TTCCAGCAAG TATATCTACT CGCAATACTA GACAAAGTAT TGAAACTAAA
CCAACTAAAA GTCAACTTAA TTTATCAGAA GTTTTTGAGT TTATTTTATC ATCAATTAAA
TCTCCTATAA ACCCTGATAC TAGAATCACT ATTAAGGCAG TGGGTGATAT TATTCCAGGT
ACTAATTATC CTCAAAATAA ATTACATCCA AGGAAACAAG AATTACTGGC ATCAGTGAAA
CCACTTTTGC AAAATGCTGA TCTTGTATTT GGTAATTTTG AAAGTACCTT AACAAATTAT
CCTAAGAGTC GGAAAAGAAT GGGTAATGGT CGGGTATTTG CTTTTAGAAC ACCGCCAGAT
TATAGAAATT TATTGAAAGA TGCTGGTTTT AATATATTAA GTGTGGCAAA TAATCATTCT
TTCGATTTCT TTAAGCAAGG TTTTGAGGAT ACAATTGCAA ATATTAAGAC TGTAGGAATG
CAGGCAGTTG GTAAAAAAGG AGAAATTGTT TATCGGAAAG TTAAAGGAAT TAATATAGGG
TTTATTGCGT TTAGTAATTA TAGTTATCAT AACTCTATGC TTGACCTATA TTCTGCTAAG
AAACTTGTGC AAGAAGCAGA TAAAAATGCA GATATTGTTG TTATATCTGT TCATGCAGGT
GCAGAAGGAA CTAGAGCATT AAGAATCAAG AATAAAACAG AGTATTTTTT TGGTGAAAAT
AGAGGCAATA AAGTTTTATT TGCCCATAAA TTAATAGATG AAGGTGCAGA TTTAATTTTG
GGTCATGGTC CTCATGTACC AAGAGCAATG GAAATTTATC AAGGAAAATT AATTGCTTAT
TCTCTAGGAA ATTTTATGGG TTATCGTACT TTATCTAGTA AGGGAAAGTT GGGATATTCT
TTGGTTTTAG AGTTAGATAT TAATATTAGA GGAGATTTTA TTTCTGGAAA AATTTTGCCT
GTACATTTGA ATAGTAAGGG TATTCCTTAT CCCGATAAAC TTGGTCGAAG TATTAAGTTA
ATTAAGGAAT TAACACAAAA AGATTTTCCG AAGACAATGT TAGAAATTAA TAGTAAGGGT
GAGATAACAA GGAAGAAAGG ATAA
 
Protein sequence
MSQEEILIRG KQGDPKAIAF LINQILNNIG IQARANIQKK NLHLLLEASE VPNREISIRV 
IYQVMKVLKS PLIDFVNIYG RINGHTIPEW TEVIELHQAK IYHPAGLETI LWQLENTNYA
QEYSILTLPY LPKKATLHNS EITKKKQKEE VDYSVININQ TVINRCHVVK KEKKFFSQME
RQYSKNKNKF IWILASAISI LLLPISTVVI NSQTDRINPI ISKIFLLPKI SHLNTSEVEV
SNSVPASIST RNTRQSIETK PTKSQLNLSE VFEFILSSIK SPINPDTRIT IKAVGDIIPG
TNYPQNKLHP RKQELLASVK PLLQNADLVF GNFESTLTNY PKSRKRMGNG RVFAFRTPPD
YRNLLKDAGF NILSVANNHS FDFFKQGFED TIANIKTVGM QAVGKKGEIV YRKVKGINIG
FIAFSNYSYH NSMLDLYSAK KLVQEADKNA DIVVISVHAG AEGTRALRIK NKTEYFFGEN
RGNKVLFAHK LIDEGADLIL GHGPHVPRAM EIYQGKLIAY SLGNFMGYRT LSSKGKLGYS
LVLELDINIR GDFISGKILP VHLNSKGIPY PDKLGRSIKL IKELTQKDFP KTMLEINSKG
EITRKKG