Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0930 |
Symbol | |
ID | 4242895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 1466317 |
End bp | 1466853 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638106186 |
Product | translation initiation factor 3 |
Protein accession | YP_720798 |
Protein GI | 113474737 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAATCG AAAAAAAAAA TAATCGTAAT CTCCCTCAAG TTAACGAAAA GATTAGAGTT CCCAAAGTTA GGGCTGTTGA TGCAGATGGC CAACAATTAG GAATTGTAGA AACAAGAGAA GCTTTACGGA TGGCCCAGGA AAAAGGTCTC GATCTGGTTA TGGTCAGTGA TAAAGCTGAT CCACCAGTTT GTAGAATAAT TGATTACGGT AAATATCTGT TTGAACAGAA AAAGAAAGTT CAGGATGCCA AACGTAAGCA GCATAATGCC GAAGTTAAGG AAGTGAAGAT GCGCTATAAA ATTGAGGAGC ATGACTATAA TGTCCGCTTA TCTCATGCAA AGCGTTTTCT CGAGTCTGGT GATAAAGTGA AAGCCACTAT TATGTTCCGA GGCCGGGAAA TACAACACAG TAACCTTGCA GAAGAATTAT TGCAACGGAT GGCAACAGAT TTAAAAGATT TAGCGGAGAT TCAACAAGCT CCCAAAAAGG AGGGACGTAG TATGATGATG TTGTTATCTC CTAAAAAGTC AAGTTGA
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Protein sequence | MPIEKKNNRN LPQVNEKIRV PKVRAVDADG QQLGIVETRE ALRMAQEKGL DLVMVSDKAD PPVCRIIDYG KYLFEQKKKV QDAKRKQHNA EVKEVKMRYK IEEHDYNVRL SHAKRFLESG DKVKATIMFR GREIQHSNLA EELLQRMATD LKDLAEIQQA PKKEGRSMMM LLSPKKSS
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