Gene Tery_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0930 
Symbol 
ID4242895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1466317 
End bp1466853 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content39% 
IMG OID638106186 
Producttranslation initiation factor 3 
Protein accessionYP_720798 
Protein GI113474737 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATCG AAAAAAAAAA TAATCGTAAT CTCCCTCAAG TTAACGAAAA GATTAGAGTT 
CCCAAAGTTA GGGCTGTTGA TGCAGATGGC CAACAATTAG GAATTGTAGA AACAAGAGAA
GCTTTACGGA TGGCCCAGGA AAAAGGTCTC GATCTGGTTA TGGTCAGTGA TAAAGCTGAT
CCACCAGTTT GTAGAATAAT TGATTACGGT AAATATCTGT TTGAACAGAA AAAGAAAGTT
CAGGATGCCA AACGTAAGCA GCATAATGCC GAAGTTAAGG AAGTGAAGAT GCGCTATAAA
ATTGAGGAGC ATGACTATAA TGTCCGCTTA TCTCATGCAA AGCGTTTTCT CGAGTCTGGT
GATAAAGTGA AAGCCACTAT TATGTTCCGA GGCCGGGAAA TACAACACAG TAACCTTGCA
GAAGAATTAT TGCAACGGAT GGCAACAGAT TTAAAAGATT TAGCGGAGAT TCAACAAGCT
CCCAAAAAGG AGGGACGTAG TATGATGATG TTGTTATCTC CTAAAAAGTC AAGTTGA
 
Protein sequence
MPIEKKNNRN LPQVNEKIRV PKVRAVDADG QQLGIVETRE ALRMAQEKGL DLVMVSDKAD 
PPVCRIIDYG KYLFEQKKKV QDAKRKQHNA EVKEVKMRYK IEEHDYNVRL SHAKRFLESG
DKVKATIMFR GREIQHSNLA EELLQRMATD LKDLAEIQQA PKKEGRSMMM LLSPKKSS