Gene Tery_0907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0907 
SymbolguaA 
ID4245570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1432961 
End bp1434688 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content38% 
IMG OID638106167 
ProductGMP synthase 
Protein accessionYP_720779 
Protein GI113474718 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain
[COG0519] GMP synthase, PP-ATPase domain/subunit 
TIGRFAM ID[TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGTCAAC AGAAAAATTT TTCTCACAAT TATTTATTAG TTTGGCTAAT AACTCAGAAA 
ATAATTGTTA CTAACACAAG AAAATTAATC ATTAAAGTCC AACACAATAA AATATTAATC
GTGACCCTAA CAACACAGAC ACAAAAAAAC TCAGATTCTC TCACTCAATT TAACCGTCAA
ATGATCGTAA TTTTGGATTT TGGTTCTCAA TATTCAGAAC TAATTGCCCG CCGAATTCGG
GAAACTCAAG TATATTCAGA GGTTATTTCT TACCGCACAA CTGCAGCTAA ACTGGCAGAT
ATAAACCCCA AGGGAATCAT TCTTTCTGGT GGGCCAAATT CTGTTTACGA TGAAGGGGCA
CCTCATTGCG ATCCCGAAAT TTGGAATTTG GGAATACCCA TTTTGGGTGT ATGCTACGGT
ATGCAGTTAA TGGTAAAACA ACTGGGCGGA GAAGTTGAAC GCACTCAGTT AGCTGAATAT
GGTAAAGCAT CTGTATCAAT AGATGATCCT ACAGATTTGC TAACAAATAT AGAAGAAGGT
ACAACTATGT GGATGAGTCA TGGAGATTCT GTCACCAAAA TGCCTTCTGG TTTTGAAGTA
TTAGCTCATA CAGATAATAC TCCTTGTGGA GCAATAGCTG ACCACAATAA AAAGCTCTAT
GGTACTCAGT TTCACCCAGA GGTAGTTCAT TCTATTGGTG GTCAAGTATT AATTCGGAAT
TTTGTTTACC ATATCTGCAA GTGTGAACCA ACCTGGACGA CAGAAGCTTT TGTAGAAGAA
GCGATTCGAG AAATTAGAGC TAAAGTAGGG GATAAACGAG TATTATTAGC TCTGTCTGGA
GGGGTAGACT CTTCGACTTT AGCATTTTTA CTCCATCAGG CCATTGGAGA TAAATTAACT
TGTATGTTTA TTGACCAAGG GTTTATGCGA AAGTATGAAC CAGAGAACTT GGTAAAAATA
TTTCACGAAT CTTTTCATAT ATCAGTTAAA TATGTGAATG CTCGCGATCG CTTCTTATCT
ATACTCAAAG GGGTCAGTGA TCCAGAAGAA AAACGGAAAT TAATCGGCCA TGAATTTATT
CAAGTATTTG AAGAAGAGTC AAAACGTTTG GGACCTTTTG ATTATCTAGC TCAAGGTACT
CTTTATCCAG ACGTGATTGA ATCTGCTAAT ACGAATGTTG ACCCCAAAAC CGGGGAGCGA
GTAGCGGTTA AAATTAAGAG TCATCACAAT GTTGGTGGTT TGCCGAAAGA TTTGAGATTT
AAATTGGTCG AACCTTTGCG CAAACTATTT AAGGATGAAG TGAGAAACGT TGGTCGTTCT
ATTGGCTTAC CAGAAGAAAT TGTGCGACGA CATCCTTTTC CTGGCCCGGG ATTAGCAATT
CGGATTTTAG GGGAGGTTAC AGACAAACGT TTGAAAATAT TACGGGATGC TGATTTTATT
GTGCGCGATG AAATTAGGCA GCAAGGTATG TATCATGATT TTTGGCAAGC GTTTGCTGTT
TTGTTACCTA TTCAAAGTGT TGGGGTAATG GGGGATCAAC GTACTTATGC TTACCCCATT
GTTTTGCGGT TTGTTAAGAG TGAGGATGGA ATGACTGCTG ACTGGTCTCG TGTACCTTAT
GATTTGTTAG AAACTATTTC TAACCGCATT GTGAATGAGG TTAAGGGAGT TAATCGGGTG
GTGTATGATA TTACTTCTAA ACCTCCAGGT ACTATTGAGT GGGAATAA
 
Protein sequence
MCQQKNFSHN YLLVWLITQK IIVTNTRKLI IKVQHNKILI VTLTTQTQKN SDSLTQFNRQ 
MIVILDFGSQ YSELIARRIR ETQVYSEVIS YRTTAAKLAD INPKGIILSG GPNSVYDEGA
PHCDPEIWNL GIPILGVCYG MQLMVKQLGG EVERTQLAEY GKASVSIDDP TDLLTNIEEG
TTMWMSHGDS VTKMPSGFEV LAHTDNTPCG AIADHNKKLY GTQFHPEVVH SIGGQVLIRN
FVYHICKCEP TWTTEAFVEE AIREIRAKVG DKRVLLALSG GVDSSTLAFL LHQAIGDKLT
CMFIDQGFMR KYEPENLVKI FHESFHISVK YVNARDRFLS ILKGVSDPEE KRKLIGHEFI
QVFEEESKRL GPFDYLAQGT LYPDVIESAN TNVDPKTGER VAVKIKSHHN VGGLPKDLRF
KLVEPLRKLF KDEVRNVGRS IGLPEEIVRR HPFPGPGLAI RILGEVTDKR LKILRDADFI
VRDEIRQQGM YHDFWQAFAV LLPIQSVGVM GDQRTYAYPI VLRFVKSEDG MTADWSRVPY
DLLETISNRI VNEVKGVNRV VYDITSKPPG TIEWE