| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0886 |
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| Symbol | |
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| ID | 4245549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 1406490 |
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| End bp | 1407422 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638106148 |
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| Product | spermidine synthase |
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| Protein accession | YP_720760 |
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| Protein GI | 113474699 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.176516 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAATA ACATGGTAGC TTCAGATCTG TGGATAAGTG AGCATATTAC ACCTTGGGAT
ATTTATGTTC ATGGCCTTAC TAAGGTACTT GCCTACAAAA AAACTGCTTA CCAAGAAATG
TACATTGTAG AAACAGGTAT TTATGGTAAG GCACTGGTTC TTGATGGTAA ATGGCAGTCT
TGTACAGGGG ATGAATTTCT ATACCATGAA CCCCTGGTCC ATCCTGCTAT GATTTGTCAT
GGGTCTCCTC GCAAAGTTCT TGTTCTTGGT GGTGGTGAGG GAGCTACTAT TCGGGAAGTT
TTCCGTTGGC AAAGTGTAGA AAAAGTGGCC ATGGTTGATA TTGATGGAGA AGTAGTAGAA
GCTTGTCGTC AATATTTGCC GGAGATGCAT GCCAATGCTT TTGATGACCC CCGCCTCCAG
TTGGTCATTG GTGATGCTTT AAAATTTTTG GAGACTTTTG GTGAGAGTTG GGATGTGGTC
ATTTCTGATC TTTCTGATCC TATTGAAGAG GGACCATCAT TTCAATTGTT TACAAAGGAA
TATTTTGAAA AAATTCTGCG GGTACTTACC CCGGGAGGAT TTTTTGTTGT ACAGGCAGGT
CCTGTTTCCC CTGGTGAAAT GAAACTTCAT GCTCGAATTG TTAATACAAT GAAGGCTGTA
TTTCCTTTTG TTCAATCTTA TAATAGTAAT ATTCCTACTT ATGGTCGACC TTGGGGTTTT
GCACTGGGCT CTAGGAAAAT GGTTAATAGT CGCCCTGAAC CAGAAATGAT TGATAAACTT
CTGAAAGAAA AAACTATTGG TGGGTTCCGG ATGTTGGATG GCACTACCTT ATTAGGAATG
TTGCAGGTAC CACTACATCT GCGAGAAGCG ATCGCTACTG AAACAAAAAT CTATACTTTA
GCAGAACCTC CAAAATTTGG TCGTCCTGCA TAG
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| Protein sequence | MANNMVASDL WISEHITPWD IYVHGLTKVL AYKKTAYQEM YIVETGIYGK ALVLDGKWQS
CTGDEFLYHE PLVHPAMICH GSPRKVLVLG GGEGATIREV FRWQSVEKVA MVDIDGEVVE
ACRQYLPEMH ANAFDDPRLQ LVIGDALKFL ETFGESWDVV ISDLSDPIEE GPSFQLFTKE
YFEKILRVLT PGGFFVVQAG PVSPGEMKLH ARIVNTMKAV FPFVQSYNSN IPTYGRPWGF
ALGSRKMVNS RPEPEMIDKL LKEKTIGGFR MLDGTTLLGM LQVPLHLREA IATETKIYTL
AEPPKFGRPA
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